Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25322 | 76189;76190;76191 | chr2:178570168;178570167;178570166 | chr2:179434895;179434894;179434893 |
N2AB | 23681 | 71266;71267;71268 | chr2:178570168;178570167;178570166 | chr2:179434895;179434894;179434893 |
N2A | 22754 | 68485;68486;68487 | chr2:178570168;178570167;178570166 | chr2:179434895;179434894;179434893 |
N2B | 16257 | 48994;48995;48996 | chr2:178570168;178570167;178570166 | chr2:179434895;179434894;179434893 |
Novex-1 | 16382 | 49369;49370;49371 | chr2:178570168;178570167;178570166 | chr2:179434895;179434894;179434893 |
Novex-2 | 16449 | 49570;49571;49572 | chr2:178570168;178570167;178570166 | chr2:179434895;179434894;179434893 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | None | N | 0.258 | 0.14 | 0.319970858106 | gnomAD-4.0.0 | 2.73724E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.5983E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.474 | ambiguous | 0.4059 | ambiguous | -1.996 | Destabilizing | 0.035 | N | 0.397 | neutral | None | None | None | None | N |
I/C | 0.8333 | likely_pathogenic | 0.8432 | pathogenic | -1.371 | Destabilizing | 0.824 | D | 0.545 | neutral | None | None | None | None | N |
I/D | 0.9375 | likely_pathogenic | 0.9188 | pathogenic | -1.557 | Destabilizing | 0.38 | N | 0.617 | neutral | None | None | None | None | N |
I/E | 0.9036 | likely_pathogenic | 0.88 | pathogenic | -1.518 | Destabilizing | 0.38 | N | 0.601 | neutral | None | None | None | None | N |
I/F | 0.4131 | ambiguous | 0.3798 | ambiguous | -1.352 | Destabilizing | 0.317 | N | 0.551 | neutral | N | 0.487177247 | None | None | N |
I/G | 0.8754 | likely_pathogenic | 0.8593 | pathogenic | -2.363 | Highly Destabilizing | 0.149 | N | 0.591 | neutral | None | None | None | None | N |
I/H | 0.8471 | likely_pathogenic | 0.8282 | pathogenic | -1.545 | Destabilizing | 0.935 | D | 0.634 | neutral | None | None | None | None | N |
I/K | 0.8661 | likely_pathogenic | 0.8522 | pathogenic | -1.418 | Destabilizing | 0.38 | N | 0.604 | neutral | None | None | None | None | N |
I/L | 0.2039 | likely_benign | 0.189 | benign | -1.033 | Destabilizing | 0.012 | N | 0.378 | neutral | N | 0.43892194 | None | None | N |
I/M | 0.1367 | likely_benign | 0.1268 | benign | -0.862 | Destabilizing | 0.317 | N | 0.559 | neutral | N | 0.473266587 | None | None | N |
I/N | 0.5706 | likely_pathogenic | 0.4908 | ambiguous | -1.294 | Destabilizing | 0.317 | N | 0.625 | neutral | N | 0.447061421 | None | None | N |
I/P | 0.9746 | likely_pathogenic | 0.9691 | pathogenic | -1.325 | Destabilizing | 0.555 | D | 0.621 | neutral | None | None | None | None | N |
I/Q | 0.8321 | likely_pathogenic | 0.8128 | pathogenic | -1.453 | Destabilizing | 0.555 | D | 0.645 | neutral | None | None | None | None | N |
I/R | 0.8138 | likely_pathogenic | 0.7976 | pathogenic | -0.836 | Destabilizing | 0.38 | N | 0.623 | neutral | None | None | None | None | N |
I/S | 0.5082 | ambiguous | 0.4224 | ambiguous | -1.973 | Destabilizing | 0.062 | N | 0.501 | neutral | N | 0.42835823 | None | None | N |
I/T | 0.1783 | likely_benign | 0.1297 | benign | -1.815 | Destabilizing | None | N | 0.258 | neutral | N | 0.324057639 | None | None | N |
I/V | 0.0758 | likely_benign | 0.0784 | benign | -1.325 | Destabilizing | None | N | 0.197 | neutral | N | 0.355804698 | None | None | N |
I/W | 0.9206 | likely_pathogenic | 0.9222 | pathogenic | -1.438 | Destabilizing | 0.935 | D | 0.668 | neutral | None | None | None | None | N |
I/Y | 0.7969 | likely_pathogenic | 0.786 | pathogenic | -1.228 | Destabilizing | 0.555 | D | 0.566 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.