Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25326 | 76201;76202;76203 | chr2:178570156;178570155;178570154 | chr2:179434883;179434882;179434881 |
N2AB | 23685 | 71278;71279;71280 | chr2:178570156;178570155;178570154 | chr2:179434883;179434882;179434881 |
N2A | 22758 | 68497;68498;68499 | chr2:178570156;178570155;178570154 | chr2:179434883;179434882;179434881 |
N2B | 16261 | 49006;49007;49008 | chr2:178570156;178570155;178570154 | chr2:179434883;179434882;179434881 |
Novex-1 | 16386 | 49381;49382;49383 | chr2:178570156;178570155;178570154 | chr2:179434883;179434882;179434881 |
Novex-2 | 16453 | 49582;49583;49584 | chr2:178570156;178570155;178570154 | chr2:179434883;179434882;179434881 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs767430531 | -0.857 | 0.014 | N | 0.333 | 0.191 | 0.275215494804 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
E/G | rs767430531 | -0.857 | 0.014 | N | 0.333 | 0.191 | 0.275215494804 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/G | rs767430531 | -0.857 | 0.014 | N | 0.333 | 0.191 | 0.275215494804 | gnomAD-4.0.0 | 1.17765E-05 | None | None | None | None | N | None | 1.33554E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44114E-05 | 0 | 1.60154E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1433 | likely_benign | 0.1557 | benign | -0.35 | Destabilizing | 0.822 | D | 0.584 | neutral | N | 0.474461453 | None | None | N |
E/C | 0.7244 | likely_pathogenic | 0.7693 | pathogenic | -0.291 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
E/D | 0.1007 | likely_benign | 0.1281 | benign | -0.659 | Destabilizing | 0.006 | N | 0.131 | neutral | N | 0.458510565 | None | None | N |
E/F | 0.7971 | likely_pathogenic | 0.8337 | pathogenic | 0.158 | Stabilizing | 0.993 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/G | 0.1069 | likely_benign | 0.1137 | benign | -0.633 | Destabilizing | 0.014 | N | 0.333 | neutral | N | 0.514750637 | None | None | N |
E/H | 0.4553 | ambiguous | 0.4869 | ambiguous | 0.36 | Stabilizing | 0.978 | D | 0.603 | neutral | None | None | None | None | N |
E/I | 0.4797 | ambiguous | 0.5232 | ambiguous | 0.389 | Stabilizing | 0.978 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/K | 0.221 | likely_benign | 0.2057 | benign | 0.136 | Stabilizing | 0.822 | D | 0.565 | neutral | N | 0.433497478 | None | None | N |
E/L | 0.4085 | ambiguous | 0.4585 | ambiguous | 0.389 | Stabilizing | 0.978 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/M | 0.479 | ambiguous | 0.5258 | ambiguous | 0.363 | Stabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/N | 0.192 | likely_benign | 0.219 | benign | -0.461 | Destabilizing | 0.019 | N | 0.304 | neutral | None | None | None | None | N |
E/P | 0.5916 | likely_pathogenic | 0.645 | pathogenic | 0.165 | Stabilizing | 0.978 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/Q | 0.133 | likely_benign | 0.1339 | benign | -0.356 | Destabilizing | 0.942 | D | 0.599 | neutral | N | 0.492449781 | None | None | N |
E/R | 0.3352 | likely_benign | 0.3174 | benign | 0.501 | Stabilizing | 0.956 | D | 0.615 | neutral | None | None | None | None | N |
E/S | 0.1499 | likely_benign | 0.1694 | benign | -0.618 | Destabilizing | 0.754 | D | 0.558 | neutral | None | None | None | None | N |
E/T | 0.1975 | likely_benign | 0.2205 | benign | -0.376 | Destabilizing | 0.86 | D | 0.633 | neutral | None | None | None | None | N |
E/V | 0.2749 | likely_benign | 0.3016 | benign | 0.165 | Stabilizing | 0.97 | D | 0.692 | prob.neutral | N | 0.517809585 | None | None | N |
E/W | 0.8978 | likely_pathogenic | 0.9159 | pathogenic | 0.397 | Stabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
E/Y | 0.6385 | likely_pathogenic | 0.6836 | pathogenic | 0.429 | Stabilizing | 0.993 | D | 0.726 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.