Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25327 | 76204;76205;76206 | chr2:178570153;178570152;178570151 | chr2:179434880;179434879;179434878 |
N2AB | 23686 | 71281;71282;71283 | chr2:178570153;178570152;178570151 | chr2:179434880;179434879;179434878 |
N2A | 22759 | 68500;68501;68502 | chr2:178570153;178570152;178570151 | chr2:179434880;179434879;179434878 |
N2B | 16262 | 49009;49010;49011 | chr2:178570153;178570152;178570151 | chr2:179434880;179434879;179434878 |
Novex-1 | 16387 | 49384;49385;49386 | chr2:178570153;178570152;178570151 | chr2:179434880;179434879;179434878 |
Novex-2 | 16454 | 49585;49586;49587 | chr2:178570153;178570152;178570151 | chr2:179434880;179434879;179434878 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.805 | D | 0.615 | 0.225 | 0.213573922156 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5557 | ambiguous | 0.5824 | pathogenic | -0.162 | Destabilizing | 0.033 | N | 0.38 | neutral | None | None | None | None | I |
R/C | 0.2569 | likely_benign | 0.286 | benign | -0.574 | Destabilizing | 0.997 | D | 0.705 | prob.neutral | None | None | None | None | I |
R/D | 0.8453 | likely_pathogenic | 0.8633 | pathogenic | -0.687 | Destabilizing | 0.987 | D | 0.701 | prob.neutral | None | None | None | None | I |
R/E | 0.5385 | ambiguous | 0.5546 | ambiguous | -0.575 | Destabilizing | 0.916 | D | 0.61 | neutral | None | None | None | None | I |
R/F | 0.7164 | likely_pathogenic | 0.7707 | pathogenic | -0.281 | Destabilizing | 0.987 | D | 0.705 | prob.neutral | None | None | None | None | I |
R/G | 0.4945 | ambiguous | 0.5103 | ambiguous | -0.371 | Destabilizing | 0.805 | D | 0.601 | neutral | D | 0.523732693 | None | None | I |
R/H | 0.1395 | likely_benign | 0.159 | benign | -1.093 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
R/I | 0.5155 | ambiguous | 0.532 | ambiguous | 0.373 | Stabilizing | 0.967 | D | 0.707 | prob.neutral | N | 0.498093867 | None | None | I |
R/K | 0.1433 | likely_benign | 0.1474 | benign | -0.297 | Destabilizing | 0.773 | D | 0.576 | neutral | N | 0.501317193 | None | None | I |
R/L | 0.4099 | ambiguous | 0.4234 | ambiguous | 0.373 | Stabilizing | 0.845 | D | 0.614 | neutral | None | None | None | None | I |
R/M | 0.4748 | ambiguous | 0.4861 | ambiguous | -0.342 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | I |
R/N | 0.7615 | likely_pathogenic | 0.7891 | pathogenic | -0.482 | Destabilizing | 0.987 | D | 0.641 | neutral | None | None | None | None | I |
R/P | 0.4281 | ambiguous | 0.4366 | ambiguous | 0.213 | Stabilizing | 0.987 | D | 0.714 | prob.delet. | None | None | None | None | I |
R/Q | 0.164 | likely_benign | 0.1704 | benign | -0.381 | Destabilizing | 0.987 | D | 0.643 | neutral | None | None | None | None | I |
R/S | 0.7134 | likely_pathogenic | 0.7451 | pathogenic | -0.621 | Destabilizing | 0.805 | D | 0.615 | neutral | D | 0.523212618 | None | None | I |
R/T | 0.5611 | ambiguous | 0.5777 | pathogenic | -0.359 | Destabilizing | 0.892 | D | 0.651 | neutral | N | 0.479736122 | None | None | I |
R/V | 0.5778 | likely_pathogenic | 0.6009 | pathogenic | 0.213 | Stabilizing | 0.95 | D | 0.635 | neutral | None | None | None | None | I |
R/W | 0.3 | likely_benign | 0.334 | benign | -0.43 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | I |
R/Y | 0.4883 | ambiguous | 0.5441 | ambiguous | -0.054 | Destabilizing | 0.996 | D | 0.712 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.