Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25334 | 76225;76226;76227 | chr2:178570132;178570131;178570130 | chr2:179434859;179434858;179434857 |
N2AB | 23693 | 71302;71303;71304 | chr2:178570132;178570131;178570130 | chr2:179434859;179434858;179434857 |
N2A | 22766 | 68521;68522;68523 | chr2:178570132;178570131;178570130 | chr2:179434859;179434858;179434857 |
N2B | 16269 | 49030;49031;49032 | chr2:178570132;178570131;178570130 | chr2:179434859;179434858;179434857 |
Novex-1 | 16394 | 49405;49406;49407 | chr2:178570132;178570131;178570130 | chr2:179434859;179434858;179434857 |
Novex-2 | 16461 | 49606;49607;49608 | chr2:178570132;178570131;178570130 | chr2:179434859;179434858;179434857 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.97 | N | 0.621 | 0.438 | 0.371718192555 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1336 | likely_benign | 0.1462 | benign | -0.501 | Destabilizing | 0.559 | D | 0.623 | neutral | None | None | None | None | I |
S/C | 0.1022 | likely_benign | 0.1162 | benign | -0.308 | Destabilizing | 0.032 | N | 0.539 | neutral | N | 0.492123293 | None | None | I |
S/D | 0.8367 | likely_pathogenic | 0.8218 | pathogenic | -0.235 | Destabilizing | 0.754 | D | 0.656 | neutral | None | None | None | None | I |
S/E | 0.8847 | likely_pathogenic | 0.873 | pathogenic | -0.308 | Destabilizing | 0.86 | D | 0.667 | neutral | None | None | None | None | I |
S/F | 0.6139 | likely_pathogenic | 0.6052 | pathogenic | -0.984 | Destabilizing | 0.978 | D | 0.709 | prob.delet. | None | None | None | None | I |
S/G | 0.2142 | likely_benign | 0.226 | benign | -0.655 | Destabilizing | 0.822 | D | 0.605 | neutral | N | 0.480528909 | None | None | I |
S/H | 0.6288 | likely_pathogenic | 0.6149 | pathogenic | -1.218 | Destabilizing | 0.994 | D | 0.618 | neutral | None | None | None | None | I |
S/I | 0.6022 | likely_pathogenic | 0.5653 | pathogenic | -0.215 | Destabilizing | 0.942 | D | 0.704 | prob.neutral | N | 0.501718399 | None | None | I |
S/K | 0.9322 | likely_pathogenic | 0.9065 | pathogenic | -0.597 | Destabilizing | 0.86 | D | 0.669 | neutral | None | None | None | None | I |
S/L | 0.2739 | likely_benign | 0.2616 | benign | -0.215 | Destabilizing | 0.754 | D | 0.679 | prob.neutral | None | None | None | None | I |
S/M | 0.3962 | ambiguous | 0.4004 | ambiguous | 0.211 | Stabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | I |
S/N | 0.2218 | likely_benign | 0.2152 | benign | -0.374 | Destabilizing | 0.058 | N | 0.447 | neutral | N | 0.485918322 | None | None | I |
S/P | 0.9872 | likely_pathogenic | 0.9838 | pathogenic | -0.28 | Destabilizing | 0.993 | D | 0.619 | neutral | None | None | None | None | I |
S/Q | 0.7673 | likely_pathogenic | 0.7533 | pathogenic | -0.68 | Destabilizing | 0.978 | D | 0.641 | neutral | None | None | None | None | I |
S/R | 0.8782 | likely_pathogenic | 0.8456 | pathogenic | -0.357 | Destabilizing | 0.97 | D | 0.621 | neutral | N | 0.482902901 | None | None | I |
S/T | 0.22 | likely_benign | 0.2161 | benign | -0.45 | Destabilizing | 0.822 | D | 0.646 | neutral | N | 0.47365019 | None | None | I |
S/V | 0.476 | ambiguous | 0.4697 | ambiguous | -0.28 | Destabilizing | 0.956 | D | 0.666 | neutral | None | None | None | None | I |
S/W | 0.7824 | likely_pathogenic | 0.7461 | pathogenic | -0.949 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | I |
S/Y | 0.5495 | ambiguous | 0.5083 | ambiguous | -0.683 | Destabilizing | 0.993 | D | 0.705 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.