Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25335 | 76228;76229;76230 | chr2:178570129;178570128;178570127 | chr2:179434856;179434855;179434854 |
N2AB | 23694 | 71305;71306;71307 | chr2:178570129;178570128;178570127 | chr2:179434856;179434855;179434854 |
N2A | 22767 | 68524;68525;68526 | chr2:178570129;178570128;178570127 | chr2:179434856;179434855;179434854 |
N2B | 16270 | 49033;49034;49035 | chr2:178570129;178570128;178570127 | chr2:179434856;179434855;179434854 |
Novex-1 | 16395 | 49408;49409;49410 | chr2:178570129;178570128;178570127 | chr2:179434856;179434855;179434854 |
Novex-2 | 16462 | 49609;49610;49611 | chr2:178570129;178570128;178570127 | chr2:179434856;179434855;179434854 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1416617749 | 0.31 | 0.959 | N | 0.362 | 0.246 | 0.240491677333 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66003E-04 |
E/Q | rs1416617749 | 0.31 | 0.959 | N | 0.362 | 0.246 | 0.240491677333 | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02535E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1615 | likely_benign | 0.2014 | benign | -0.329 | Destabilizing | 0.061 | N | 0.137 | neutral | N | 0.488833472 | None | None | I |
E/C | 0.8431 | likely_pathogenic | 0.8925 | pathogenic | -0.048 | Destabilizing | 0.999 | D | 0.395 | neutral | None | None | None | None | I |
E/D | 0.0901 | likely_benign | 0.1078 | benign | -0.279 | Destabilizing | 0.826 | D | 0.345 | neutral | N | 0.503128134 | None | None | I |
E/F | 0.8319 | likely_pathogenic | 0.8766 | pathogenic | -0.169 | Destabilizing | 0.997 | D | 0.412 | neutral | None | None | None | None | I |
E/G | 0.2188 | likely_benign | 0.2541 | benign | -0.521 | Destabilizing | 0.704 | D | 0.42 | neutral | N | 0.476803742 | None | None | I |
E/H | 0.5115 | ambiguous | 0.5842 | pathogenic | 0.135 | Stabilizing | 0.997 | D | 0.363 | neutral | None | None | None | None | I |
E/I | 0.4251 | ambiguous | 0.5301 | ambiguous | 0.14 | Stabilizing | 0.991 | D | 0.434 | neutral | None | None | None | None | I |
E/K | 0.2036 | likely_benign | 0.2199 | benign | 0.415 | Stabilizing | 0.92 | D | 0.312 | neutral | N | 0.502320058 | None | None | I |
E/L | 0.4726 | ambiguous | 0.5777 | pathogenic | 0.14 | Stabilizing | 0.939 | D | 0.437 | neutral | None | None | None | None | I |
E/M | 0.5309 | ambiguous | 0.6142 | pathogenic | 0.183 | Stabilizing | 0.999 | D | 0.403 | neutral | None | None | None | None | I |
E/N | 0.2255 | likely_benign | 0.2763 | benign | 0.03 | Stabilizing | 0.939 | D | 0.352 | neutral | None | None | None | None | I |
E/P | 0.268 | likely_benign | 0.3487 | ambiguous | 0.004 | Stabilizing | 0.02 | N | 0.125 | neutral | None | None | None | None | I |
E/Q | 0.1735 | likely_benign | 0.1972 | benign | 0.076 | Stabilizing | 0.959 | D | 0.362 | neutral | N | 0.473485606 | None | None | I |
E/R | 0.3336 | likely_benign | 0.3598 | ambiguous | 0.627 | Stabilizing | 0.991 | D | 0.347 | neutral | None | None | None | None | I |
E/S | 0.1992 | likely_benign | 0.2456 | benign | -0.117 | Destabilizing | 0.373 | N | 0.173 | neutral | None | None | None | None | I |
E/T | 0.2337 | likely_benign | 0.2997 | benign | 0.047 | Stabilizing | 0.939 | D | 0.381 | neutral | None | None | None | None | I |
E/V | 0.2463 | likely_benign | 0.3119 | benign | 0.004 | Stabilizing | 0.92 | D | 0.425 | neutral | N | 0.487399579 | None | None | I |
E/W | 0.9432 | likely_pathogenic | 0.9547 | pathogenic | -0.009 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | I |
E/Y | 0.7074 | likely_pathogenic | 0.7611 | pathogenic | 0.081 | Stabilizing | 0.997 | D | 0.422 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.