Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25336 | 76231;76232;76233 | chr2:178570126;178570125;178570124 | chr2:179434853;179434852;179434851 |
N2AB | 23695 | 71308;71309;71310 | chr2:178570126;178570125;178570124 | chr2:179434853;179434852;179434851 |
N2A | 22768 | 68527;68528;68529 | chr2:178570126;178570125;178570124 | chr2:179434853;179434852;179434851 |
N2B | 16271 | 49036;49037;49038 | chr2:178570126;178570125;178570124 | chr2:179434853;179434852;179434851 |
Novex-1 | 16396 | 49411;49412;49413 | chr2:178570126;178570125;178570124 | chr2:179434853;179434852;179434851 |
Novex-2 | 16463 | 49612;49613;49614 | chr2:178570126;178570125;178570124 | chr2:179434853;179434852;179434851 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1707608600 | None | 1.0 | D | 0.858 | 0.562 | 0.756051586483 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1707608600 | None | 1.0 | D | 0.858 | 0.562 | 0.756051586483 | gnomAD-4.0.0 | 2.56322E-06 | None | None | None | None | I | None | 0 | 3.39109E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9829 | likely_pathogenic | 0.9829 | pathogenic | -2.41 | Highly Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | I |
I/C | 0.9786 | likely_pathogenic | 0.9813 | pathogenic | -1.611 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
I/D | 0.9976 | likely_pathogenic | 0.9958 | pathogenic | -2.259 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
I/E | 0.9957 | likely_pathogenic | 0.994 | pathogenic | -2.134 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
I/F | 0.8946 | likely_pathogenic | 0.8801 | pathogenic | -1.544 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.545274424 | None | None | I |
I/G | 0.9962 | likely_pathogenic | 0.9948 | pathogenic | -2.875 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | I |
I/H | 0.9954 | likely_pathogenic | 0.9934 | pathogenic | -2.159 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
I/K | 0.9911 | likely_pathogenic | 0.9872 | pathogenic | -1.774 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
I/L | 0.4216 | ambiguous | 0.4454 | ambiguous | -1.117 | Destabilizing | 0.993 | D | 0.436 | neutral | N | 0.492100521 | None | None | I |
I/M | 0.6008 | likely_pathogenic | 0.6051 | pathogenic | -0.919 | Destabilizing | 1.0 | D | 0.836 | deleterious | D | 0.547809319 | None | None | I |
I/N | 0.9493 | likely_pathogenic | 0.9132 | pathogenic | -1.808 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.560179583 | None | None | I |
I/P | 0.9727 | likely_pathogenic | 0.9694 | pathogenic | -1.523 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | I |
I/Q | 0.9941 | likely_pathogenic | 0.9921 | pathogenic | -1.843 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
I/R | 0.9893 | likely_pathogenic | 0.9851 | pathogenic | -1.279 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
I/S | 0.982 | likely_pathogenic | 0.9781 | pathogenic | -2.519 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.559419114 | None | None | I |
I/T | 0.9696 | likely_pathogenic | 0.9704 | pathogenic | -2.262 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.525185614 | None | None | I |
I/V | 0.1573 | likely_benign | 0.2184 | benign | -1.523 | Destabilizing | 0.993 | D | 0.409 | neutral | N | 0.505555151 | None | None | I |
I/W | 0.9971 | likely_pathogenic | 0.9954 | pathogenic | -1.789 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
I/Y | 0.9787 | likely_pathogenic | 0.9711 | pathogenic | -1.552 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.