Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2534 | 7825;7826;7827 | chr2:178773364;178773363;178773362 | chr2:179638091;179638090;179638089 |
N2AB | 2534 | 7825;7826;7827 | chr2:178773364;178773363;178773362 | chr2:179638091;179638090;179638089 |
N2A | 2534 | 7825;7826;7827 | chr2:178773364;178773363;178773362 | chr2:179638091;179638090;179638089 |
N2B | 2488 | 7687;7688;7689 | chr2:178773364;178773363;178773362 | chr2:179638091;179638090;179638089 |
Novex-1 | 2488 | 7687;7688;7689 | chr2:178773364;178773363;178773362 | chr2:179638091;179638090;179638089 |
Novex-2 | 2488 | 7687;7688;7689 | chr2:178773364;178773363;178773362 | chr2:179638091;179638090;179638089 |
Novex-3 | 2534 | 7825;7826;7827 | chr2:178773364;178773363;178773362 | chr2:179638091;179638090;179638089 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs767167863 | 0.292 | 0.012 | N | 0.153 | 0.321 | 0.224531998449 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
K/E | rs767167863 | 0.292 | 0.012 | N | 0.153 | 0.321 | 0.224531998449 | gnomAD-4.0.0 | 6.36343E-06 | None | None | None | None | N | None | 0 | 2.28728E-05 | None | 0 | 0 | None | 0 | 0 | 8.57016E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2543 | likely_benign | 0.2826 | benign | -0.128 | Destabilizing | 0.525 | D | 0.315 | neutral | None | None | None | None | N |
K/C | 0.5872 | likely_pathogenic | 0.624 | pathogenic | -0.29 | Destabilizing | 0.998 | D | 0.241 | neutral | None | None | None | None | N |
K/D | 0.2989 | likely_benign | 0.3147 | benign | 0.035 | Stabilizing | 0.728 | D | 0.321 | neutral | None | None | None | None | N |
K/E | 0.0996 | likely_benign | 0.1093 | benign | 0.103 | Stabilizing | 0.012 | N | 0.153 | neutral | N | 0.442882001 | None | None | N |
K/F | 0.7111 | likely_pathogenic | 0.7214 | pathogenic | -0.02 | Destabilizing | 0.974 | D | 0.283 | neutral | None | None | None | None | N |
K/G | 0.3729 | ambiguous | 0.4099 | ambiguous | -0.408 | Destabilizing | 0.842 | D | 0.347 | neutral | None | None | None | None | N |
K/H | 0.189 | likely_benign | 0.2115 | benign | -0.584 | Destabilizing | 0.016 | N | 0.205 | neutral | None | None | None | None | N |
K/I | 0.3401 | ambiguous | 0.3528 | ambiguous | 0.561 | Stabilizing | 0.966 | D | 0.305 | neutral | D | 0.563749989 | None | None | N |
K/L | 0.3463 | ambiguous | 0.367 | ambiguous | 0.561 | Stabilizing | 0.842 | D | 0.319 | neutral | None | None | None | None | N |
K/M | 0.2269 | likely_benign | 0.2401 | benign | 0.137 | Stabilizing | 0.991 | D | 0.259 | neutral | None | None | None | None | N |
K/N | 0.194 | likely_benign | 0.2055 | benign | -0.042 | Destabilizing | 0.801 | D | 0.232 | neutral | D | 0.56216408 | None | None | N |
K/P | 0.7381 | likely_pathogenic | 0.7833 | pathogenic | 0.361 | Stabilizing | 0.974 | D | 0.344 | neutral | None | None | None | None | N |
K/Q | 0.0921 | likely_benign | 0.106 | benign | -0.087 | Destabilizing | 0.136 | N | 0.211 | neutral | N | 0.496956759 | None | None | N |
K/R | 0.0855 | likely_benign | 0.0934 | benign | -0.213 | Destabilizing | 0.801 | D | 0.266 | neutral | N | 0.511698882 | None | None | N |
K/S | 0.2274 | likely_benign | 0.2459 | benign | -0.525 | Destabilizing | 0.172 | N | 0.161 | neutral | None | None | None | None | N |
K/T | 0.1083 | likely_benign | 0.121 | benign | -0.281 | Destabilizing | 0.669 | D | 0.324 | neutral | N | 0.511804886 | None | None | N |
K/V | 0.2893 | likely_benign | 0.3162 | benign | 0.361 | Stabilizing | 0.915 | D | 0.328 | neutral | None | None | None | None | N |
K/W | 0.7072 | likely_pathogenic | 0.7318 | pathogenic | -0.033 | Destabilizing | 0.998 | D | 0.289 | neutral | None | None | None | None | N |
K/Y | 0.5374 | ambiguous | 0.5561 | ambiguous | 0.276 | Stabilizing | 0.949 | D | 0.309 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.