Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25342 | 76249;76250;76251 | chr2:178570108;178570107;178570106 | chr2:179434835;179434834;179434833 |
N2AB | 23701 | 71326;71327;71328 | chr2:178570108;178570107;178570106 | chr2:179434835;179434834;179434833 |
N2A | 22774 | 68545;68546;68547 | chr2:178570108;178570107;178570106 | chr2:179434835;179434834;179434833 |
N2B | 16277 | 49054;49055;49056 | chr2:178570108;178570107;178570106 | chr2:179434835;179434834;179434833 |
Novex-1 | 16402 | 49429;49430;49431 | chr2:178570108;178570107;178570106 | chr2:179434835;179434834;179434833 |
Novex-2 | 16469 | 49630;49631;49632 | chr2:178570108;178570107;178570106 | chr2:179434835;179434834;179434833 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs762672000 | -1.796 | 1.0 | N | 0.739 | 0.346 | 0.363158594168 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
E/Q | rs762672000 | -1.796 | 1.0 | N | 0.739 | 0.346 | 0.363158594168 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs762672000 | -1.796 | 1.0 | N | 0.739 | 0.346 | 0.363158594168 | gnomAD-4.0.0 | 3.84524E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.18236E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9289 | likely_pathogenic | 0.8913 | pathogenic | -1.962 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | D | 0.535026846 | None | None | N |
E/C | 0.9877 | likely_pathogenic | 0.9838 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/D | 0.7655 | likely_pathogenic | 0.7141 | pathogenic | -1.659 | Destabilizing | 0.999 | D | 0.632 | neutral | N | 0.493969718 | None | None | N |
E/F | 0.9921 | likely_pathogenic | 0.987 | pathogenic | -1.608 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
E/G | 0.9338 | likely_pathogenic | 0.892 | pathogenic | -2.348 | Highly Destabilizing | 1.0 | D | 0.778 | deleterious | D | 0.525444968 | None | None | N |
E/H | 0.9674 | likely_pathogenic | 0.9592 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/I | 0.9845 | likely_pathogenic | 0.9767 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
E/K | 0.9594 | likely_pathogenic | 0.939 | pathogenic | -1.918 | Destabilizing | 0.999 | D | 0.671 | neutral | N | 0.515819728 | None | None | N |
E/L | 0.971 | likely_pathogenic | 0.9537 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/M | 0.9738 | likely_pathogenic | 0.9587 | pathogenic | -0.043 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/N | 0.9743 | likely_pathogenic | 0.9615 | pathogenic | -2.038 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/P | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -1.206 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
E/Q | 0.6209 | likely_pathogenic | 0.5469 | ambiguous | -1.762 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.480585496 | None | None | N |
E/R | 0.9599 | likely_pathogenic | 0.9459 | pathogenic | -1.667 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/S | 0.9285 | likely_pathogenic | 0.8971 | pathogenic | -2.759 | Highly Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/T | 0.9701 | likely_pathogenic | 0.9559 | pathogenic | -2.396 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/V | 0.9552 | likely_pathogenic | 0.9341 | pathogenic | -1.206 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.535787315 | None | None | N |
E/W | 0.9931 | likely_pathogenic | 0.9905 | pathogenic | -1.626 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/Y | 0.9849 | likely_pathogenic | 0.9793 | pathogenic | -1.436 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.