Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25343 | 76252;76253;76254 | chr2:178570105;178570104;178570103 | chr2:179434832;179434831;179434830 |
N2AB | 23702 | 71329;71330;71331 | chr2:178570105;178570104;178570103 | chr2:179434832;179434831;179434830 |
N2A | 22775 | 68548;68549;68550 | chr2:178570105;178570104;178570103 | chr2:179434832;179434831;179434830 |
N2B | 16278 | 49057;49058;49059 | chr2:178570105;178570104;178570103 | chr2:179434832;179434831;179434830 |
Novex-1 | 16403 | 49432;49433;49434 | chr2:178570105;178570104;178570103 | chr2:179434832;179434831;179434830 |
Novex-2 | 16470 | 49633;49634;49635 | chr2:178570105;178570104;178570103 | chr2:179434832;179434831;179434830 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs727504596 | -2.253 | 0.944 | N | 0.725 | 0.456 | 0.348764635752 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/E | rs727504596 | -2.253 | 0.944 | N | 0.725 | 0.456 | 0.348764635752 | gnomAD-4.0.0 | 4.7903E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39757E-06 | 0 | 1.65695E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9857 | likely_pathogenic | 0.9836 | pathogenic | -1.45 | Destabilizing | 0.916 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/C | 0.9515 | likely_pathogenic | 0.9476 | pathogenic | -1.465 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
K/D | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -2.178 | Highly Destabilizing | 0.996 | D | 0.812 | deleterious | None | None | None | None | N |
K/E | 0.9707 | likely_pathogenic | 0.9646 | pathogenic | -1.845 | Destabilizing | 0.944 | D | 0.725 | prob.delet. | N | 0.492119612 | None | None | N |
K/F | 0.9909 | likely_pathogenic | 0.988 | pathogenic | -0.648 | Destabilizing | 0.975 | D | 0.857 | deleterious | None | None | None | None | N |
K/G | 0.9872 | likely_pathogenic | 0.9844 | pathogenic | -1.961 | Destabilizing | 0.987 | D | 0.781 | deleterious | None | None | None | None | N |
K/H | 0.8637 | likely_pathogenic | 0.8434 | pathogenic | -1.768 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
K/I | 0.9526 | likely_pathogenic | 0.952 | pathogenic | 0.017 | Stabilizing | 0.935 | D | 0.836 | deleterious | N | 0.467708254 | None | None | N |
K/L | 0.9149 | likely_pathogenic | 0.9084 | pathogenic | 0.017 | Stabilizing | 0.653 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/M | 0.8153 | likely_pathogenic | 0.7923 | pathogenic | -0.33 | Destabilizing | 0.693 | D | 0.613 | neutral | None | None | None | None | N |
K/N | 0.991 | likely_pathogenic | 0.9892 | pathogenic | -2.013 | Highly Destabilizing | 0.983 | D | 0.799 | deleterious | N | 0.518617658 | None | None | N |
K/P | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -0.454 | Destabilizing | 0.996 | D | 0.821 | deleterious | None | None | None | None | N |
K/Q | 0.7223 | likely_pathogenic | 0.7016 | pathogenic | -1.569 | Destabilizing | 0.983 | D | 0.788 | deleterious | N | 0.485536247 | None | None | N |
K/R | 0.1281 | likely_benign | 0.1164 | benign | -1.003 | Destabilizing | 0.944 | D | 0.703 | prob.neutral | N | 0.456123621 | None | None | N |
K/S | 0.9901 | likely_pathogenic | 0.9891 | pathogenic | -2.502 | Highly Destabilizing | 0.916 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/T | 0.9623 | likely_pathogenic | 0.962 | pathogenic | -1.897 | Destabilizing | 0.967 | D | 0.771 | deleterious | N | 0.496777194 | None | None | N |
K/V | 0.9339 | likely_pathogenic | 0.9326 | pathogenic | -0.454 | Destabilizing | 0.845 | D | 0.765 | deleterious | None | None | None | None | N |
K/W | 0.9819 | likely_pathogenic | 0.9785 | pathogenic | -0.75 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
K/Y | 0.9521 | likely_pathogenic | 0.9387 | pathogenic | -0.398 | Destabilizing | 0.987 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.