Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25352 | 76279;76280;76281 | chr2:178570078;178570077;178570076 | chr2:179434805;179434804;179434803 |
N2AB | 23711 | 71356;71357;71358 | chr2:178570078;178570077;178570076 | chr2:179434805;179434804;179434803 |
N2A | 22784 | 68575;68576;68577 | chr2:178570078;178570077;178570076 | chr2:179434805;179434804;179434803 |
N2B | 16287 | 49084;49085;49086 | chr2:178570078;178570077;178570076 | chr2:179434805;179434804;179434803 |
Novex-1 | 16412 | 49459;49460;49461 | chr2:178570078;178570077;178570076 | chr2:179434805;179434804;179434803 |
Novex-2 | 16479 | 49660;49661;49662 | chr2:178570078;178570077;178570076 | chr2:179434805;179434804;179434803 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs1318162597 | -0.236 | 0.89 | N | 0.555 | 0.319 | 0.500931478032 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/R | rs1318162597 | -0.236 | 0.89 | N | 0.555 | 0.319 | 0.500931478032 | gnomAD-4.0.0 | 4.7762E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41779E-04 | 0 | 2.86582E-05 | 0 |
T/S | None | None | 0.058 | N | 0.288 | 0.133 | 0.107399877778 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1222 | likely_benign | 0.1346 | benign | -0.642 | Destabilizing | 0.489 | N | 0.513 | neutral | N | 0.464834645 | None | None | I |
T/C | 0.4503 | ambiguous | 0.5034 | ambiguous | -0.38 | Destabilizing | 0.998 | D | 0.582 | neutral | None | None | None | None | I |
T/D | 0.8559 | likely_pathogenic | 0.8522 | pathogenic | 0.158 | Stabilizing | 0.956 | D | 0.531 | neutral | None | None | None | None | I |
T/E | 0.7395 | likely_pathogenic | 0.7288 | pathogenic | 0.142 | Stabilizing | 0.754 | D | 0.491 | neutral | None | None | None | None | I |
T/F | 0.3558 | ambiguous | 0.3711 | ambiguous | -0.757 | Destabilizing | 0.978 | D | 0.627 | neutral | None | None | None | None | I |
T/G | 0.3337 | likely_benign | 0.3691 | ambiguous | -0.874 | Destabilizing | 0.754 | D | 0.515 | neutral | None | None | None | None | I |
T/H | 0.4585 | ambiguous | 0.4641 | ambiguous | -1.043 | Destabilizing | 0.994 | D | 0.627 | neutral | None | None | None | None | I |
T/I | 0.1438 | likely_benign | 0.1517 | benign | -0.126 | Destabilizing | 0.971 | D | 0.591 | neutral | N | 0.467706052 | None | None | I |
T/K | 0.5838 | likely_pathogenic | 0.5577 | ambiguous | -0.594 | Destabilizing | 0.032 | N | 0.276 | neutral | N | 0.504125425 | None | None | I |
T/L | 0.1206 | likely_benign | 0.1337 | benign | -0.126 | Destabilizing | 0.86 | D | 0.492 | neutral | None | None | None | None | I |
T/M | 0.0936 | likely_benign | 0.0997 | benign | -0.003 | Destabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | I |
T/N | 0.2024 | likely_benign | 0.2153 | benign | -0.443 | Destabilizing | 0.915 | D | 0.511 | neutral | None | None | None | None | I |
T/P | 0.6803 | likely_pathogenic | 0.6677 | pathogenic | -0.266 | Destabilizing | 0.971 | D | 0.585 | neutral | N | 0.505286343 | None | None | I |
T/Q | 0.3914 | ambiguous | 0.3921 | ambiguous | -0.583 | Destabilizing | 0.956 | D | 0.589 | neutral | None | None | None | None | I |
T/R | 0.5426 | ambiguous | 0.5071 | ambiguous | -0.336 | Destabilizing | 0.89 | D | 0.555 | neutral | N | 0.505338933 | None | None | I |
T/S | 0.1603 | likely_benign | 0.1712 | benign | -0.74 | Destabilizing | 0.058 | N | 0.288 | neutral | N | 0.509187315 | None | None | I |
T/V | 0.1176 | likely_benign | 0.1272 | benign | -0.266 | Destabilizing | 0.86 | D | 0.487 | neutral | None | None | None | None | I |
T/W | 0.7771 | likely_pathogenic | 0.7771 | pathogenic | -0.718 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | I |
T/Y | 0.4516 | ambiguous | 0.4654 | ambiguous | -0.484 | Destabilizing | 0.993 | D | 0.629 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.