Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25353 | 76282;76283;76284 | chr2:178570075;178570074;178570073 | chr2:179434802;179434801;179434800 |
N2AB | 23712 | 71359;71360;71361 | chr2:178570075;178570074;178570073 | chr2:179434802;179434801;179434800 |
N2A | 22785 | 68578;68579;68580 | chr2:178570075;178570074;178570073 | chr2:179434802;179434801;179434800 |
N2B | 16288 | 49087;49088;49089 | chr2:178570075;178570074;178570073 | chr2:179434802;179434801;179434800 |
Novex-1 | 16413 | 49462;49463;49464 | chr2:178570075;178570074;178570073 | chr2:179434802;179434801;179434800 |
Novex-2 | 16480 | 49663;49664;49665 | chr2:178570075;178570074;178570073 | chr2:179434802;179434801;179434800 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 1.0 | N | 0.721 | 0.482 | 0.690070301869 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
R/K | None | None | 0.997 | N | 0.497 | 0.29 | 0.263140351381 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8402 | likely_pathogenic | 0.8154 | pathogenic | -0.336 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
R/C | 0.5103 | ambiguous | 0.4716 | ambiguous | -0.243 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
R/D | 0.977 | likely_pathogenic | 0.9752 | pathogenic | 0.009 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
R/E | 0.9096 | likely_pathogenic | 0.9024 | pathogenic | 0.096 | Stabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | I |
R/F | 0.9284 | likely_pathogenic | 0.9253 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
R/G | 0.8044 | likely_pathogenic | 0.775 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.497057136 | None | None | I |
R/H | 0.3401 | ambiguous | 0.3306 | benign | -1.059 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
R/I | 0.753 | likely_pathogenic | 0.7511 | pathogenic | 0.333 | Stabilizing | 1.0 | D | 0.784 | deleterious | N | 0.510323465 | None | None | I |
R/K | 0.1687 | likely_benign | 0.183 | benign | -0.329 | Destabilizing | 0.997 | D | 0.497 | neutral | N | 0.422992482 | None | None | I |
R/L | 0.6576 | likely_pathogenic | 0.6308 | pathogenic | 0.333 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
R/M | 0.8064 | likely_pathogenic | 0.805 | pathogenic | 0.026 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
R/N | 0.9518 | likely_pathogenic | 0.9503 | pathogenic | 0.167 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
R/P | 0.712 | likely_pathogenic | 0.6663 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
R/Q | 0.3483 | ambiguous | 0.3355 | benign | -0.021 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
R/S | 0.923 | likely_pathogenic | 0.9134 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.512726265 | None | None | I |
R/T | 0.8203 | likely_pathogenic | 0.8134 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.48615574 | None | None | I |
R/V | 0.7729 | likely_pathogenic | 0.7593 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
R/W | 0.6386 | likely_pathogenic | 0.6064 | pathogenic | -0.227 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
R/Y | 0.8304 | likely_pathogenic | 0.8201 | pathogenic | 0.13 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.