Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25355 | 76288;76289;76290 | chr2:178570069;178570068;178570067 | chr2:179434796;179434795;179434794 |
N2AB | 23714 | 71365;71366;71367 | chr2:178570069;178570068;178570067 | chr2:179434796;179434795;179434794 |
N2A | 22787 | 68584;68585;68586 | chr2:178570069;178570068;178570067 | chr2:179434796;179434795;179434794 |
N2B | 16290 | 49093;49094;49095 | chr2:178570069;178570068;178570067 | chr2:179434796;179434795;179434794 |
Novex-1 | 16415 | 49468;49469;49470 | chr2:178570069;178570068;178570067 | chr2:179434796;179434795;179434794 |
Novex-2 | 16482 | 49669;49670;49671 | chr2:178570069;178570068;178570067 | chr2:179434796;179434795;179434794 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs1399292028 | -1.533 | 0.285 | N | 0.317 | 0.154 | 0.191931220699 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65782E-04 |
H/R | rs1399292028 | -1.533 | 0.285 | N | 0.317 | 0.154 | 0.191931220699 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/R | rs1399292028 | -1.533 | 0.285 | N | 0.317 | 0.154 | 0.191931220699 | gnomAD-4.0.0 | 3.84518E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.18243E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3189 | likely_benign | 0.2707 | benign | 0.209 | Stabilizing | 0.103 | N | 0.334 | neutral | None | None | None | None | N |
H/C | 0.1755 | likely_benign | 0.1623 | benign | 0.691 | Stabilizing | 0.991 | D | 0.45 | neutral | None | None | None | None | N |
H/D | 0.4138 | ambiguous | 0.307 | benign | -0.219 | Destabilizing | 0.166 | N | 0.353 | neutral | N | 0.432553328 | None | None | N |
H/E | 0.6006 | likely_pathogenic | 0.4664 | ambiguous | -0.155 | Destabilizing | 0.345 | N | 0.304 | neutral | None | None | None | None | N |
H/F | 0.4131 | ambiguous | 0.3741 | ambiguous | 1.209 | Stabilizing | 0.965 | D | 0.442 | neutral | None | None | None | None | N |
H/G | 0.2599 | likely_benign | 0.2265 | benign | -0.12 | Destabilizing | 0.103 | N | 0.313 | neutral | None | None | None | None | N |
H/I | 0.3764 | ambiguous | 0.3427 | ambiguous | 1.078 | Stabilizing | 0.722 | D | 0.451 | neutral | None | None | None | None | N |
H/K | 0.5422 | ambiguous | 0.4494 | ambiguous | 0.261 | Stabilizing | 0.345 | N | 0.368 | neutral | None | None | None | None | N |
H/L | 0.1652 | likely_benign | 0.1503 | benign | 1.078 | Stabilizing | 0.447 | N | 0.397 | neutral | N | 0.427590226 | None | None | N |
H/M | 0.4689 | ambiguous | 0.4605 | ambiguous | 0.699 | Stabilizing | 0.965 | D | 0.425 | neutral | None | None | None | None | N |
H/N | 0.0475 | likely_benign | 0.0479 | benign | 0.108 | Stabilizing | None | N | 0.092 | neutral | N | 0.303413008 | None | None | N |
H/P | 0.3966 | ambiguous | 0.3471 | ambiguous | 0.813 | Stabilizing | 0.662 | D | 0.418 | neutral | N | 0.459451928 | None | None | N |
H/Q | 0.243 | likely_benign | 0.1855 | benign | 0.285 | Stabilizing | 0.491 | N | 0.326 | neutral | N | 0.452485883 | None | None | N |
H/R | 0.338 | likely_benign | 0.2464 | benign | -0.46 | Destabilizing | 0.285 | N | 0.317 | neutral | N | 0.445309195 | None | None | N |
H/S | 0.1208 | likely_benign | 0.1112 | benign | 0.251 | Stabilizing | 0.021 | N | 0.207 | neutral | None | None | None | None | N |
H/T | 0.1697 | likely_benign | 0.1601 | benign | 0.427 | Stabilizing | 0.209 | N | 0.365 | neutral | None | None | None | None | N |
H/V | 0.3031 | likely_benign | 0.2706 | benign | 0.813 | Stabilizing | 0.722 | D | 0.426 | neutral | None | None | None | None | N |
H/W | 0.6451 | likely_pathogenic | 0.5772 | pathogenic | 1.3 | Stabilizing | 0.991 | D | 0.425 | neutral | None | None | None | None | N |
H/Y | 0.1614 | likely_benign | 0.1322 | benign | 1.465 | Stabilizing | 0.856 | D | 0.357 | neutral | N | 0.408351104 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.