Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25357 | 76294;76295;76296 | chr2:178570063;178570062;178570061 | chr2:179434790;179434789;179434788 |
N2AB | 23716 | 71371;71372;71373 | chr2:178570063;178570062;178570061 | chr2:179434790;179434789;179434788 |
N2A | 22789 | 68590;68591;68592 | chr2:178570063;178570062;178570061 | chr2:179434790;179434789;179434788 |
N2B | 16292 | 49099;49100;49101 | chr2:178570063;178570062;178570061 | chr2:179434790;179434789;179434788 |
Novex-1 | 16417 | 49474;49475;49476 | chr2:178570063;178570062;178570061 | chr2:179434790;179434789;179434788 |
Novex-2 | 16484 | 49675;49676;49677 | chr2:178570063;178570062;178570061 | chr2:179434790;179434789;179434788 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs145437410 | 0.003 | 0.984 | N | 0.421 | 0.318 | None | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 3.91586E-04 | None | 0 | None | 4.65E-05 | 0 | 0 |
R/C | rs145437410 | 0.003 | 0.984 | N | 0.421 | 0.318 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93648E-04 | None | 0 | 0 | 0 | 0 | 0 |
R/C | rs145437410 | 0.003 | 0.984 | N | 0.421 | 0.318 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
R/C | rs145437410 | 0.003 | 0.984 | N | 0.421 | 0.318 | None | gnomAD-4.0.0 | 2.54132E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 7.59335E-04 | None | 3.12823E-05 | 0 | 3.39108E-06 | 0 | 1.60092E-05 |
R/H | rs397517703 | -0.619 | 0.005 | N | 0.273 | 0.071 | None | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 6.24E-05 | 0 |
R/H | rs397517703 | -0.619 | 0.005 | N | 0.273 | 0.071 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
R/H | rs397517703 | -0.619 | 0.005 | N | 0.273 | 0.071 | None | gnomAD-4.0.0 | 1.79761E-05 | None | None | None | None | I | None | 1.33579E-05 | 3.336E-05 | None | 0 | 0 | None | 0 | 0 | 2.03463E-05 | 2.19592E-05 | 0 |
R/P | None | None | 0.705 | N | 0.47 | 0.22 | 0.357929162469 | gnomAD-4.0.0 | 6.84363E-07 | None | None | None | None | I | None | 0 | 2.23674E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5451 | ambiguous | 0.4361 | ambiguous | 0.215 | Stabilizing | 0.035 | N | 0.445 | neutral | None | None | None | None | I |
R/C | 0.2979 | likely_benign | 0.2218 | benign | 0.004 | Stabilizing | 0.984 | D | 0.421 | neutral | N | 0.483548011 | None | None | I |
R/D | 0.7294 | likely_pathogenic | 0.6349 | pathogenic | -0.243 | Destabilizing | 0.001 | N | 0.292 | neutral | None | None | None | None | I |
R/E | 0.5354 | ambiguous | 0.4316 | ambiguous | -0.191 | Destabilizing | 0.081 | N | 0.377 | neutral | None | None | None | None | I |
R/F | 0.7175 | likely_pathogenic | 0.6081 | pathogenic | -0.068 | Destabilizing | 0.38 | N | 0.413 | neutral | None | None | None | None | I |
R/G | 0.3373 | likely_benign | 0.2405 | benign | 0.061 | Stabilizing | 0.001 | N | 0.267 | neutral | N | 0.471053001 | None | None | I |
R/H | 0.1428 | likely_benign | 0.1091 | benign | -0.564 | Destabilizing | 0.005 | N | 0.273 | neutral | N | 0.488620042 | None | None | I |
R/I | 0.4954 | ambiguous | 0.3979 | ambiguous | 0.577 | Stabilizing | 0.555 | D | 0.435 | neutral | None | None | None | None | I |
R/K | 0.1167 | likely_benign | 0.1047 | benign | 0.101 | Stabilizing | 0.067 | N | 0.375 | neutral | None | None | None | None | I |
R/L | 0.429 | ambiguous | 0.326 | benign | 0.577 | Stabilizing | 0.251 | N | 0.471 | neutral | N | 0.493121784 | None | None | I |
R/M | 0.4733 | ambiguous | 0.3696 | ambiguous | 0.034 | Stabilizing | 0.935 | D | 0.419 | neutral | None | None | None | None | I |
R/N | 0.6021 | likely_pathogenic | 0.4859 | ambiguous | 0.217 | Stabilizing | 0.081 | N | 0.407 | neutral | None | None | None | None | I |
R/P | 0.7839 | likely_pathogenic | 0.7091 | pathogenic | 0.475 | Stabilizing | 0.705 | D | 0.47 | neutral | N | 0.463385705 | None | None | I |
R/Q | 0.1479 | likely_benign | 0.1162 | benign | 0.194 | Stabilizing | 0.38 | N | 0.423 | neutral | None | None | None | None | I |
R/S | 0.6058 | likely_pathogenic | 0.4817 | ambiguous | 0.091 | Stabilizing | 0.251 | N | 0.509 | neutral | N | 0.455062041 | None | None | I |
R/T | 0.4059 | ambiguous | 0.3006 | benign | 0.251 | Stabilizing | 0.149 | N | 0.493 | neutral | None | None | None | None | I |
R/V | 0.5308 | ambiguous | 0.4298 | ambiguous | 0.475 | Stabilizing | 0.555 | D | 0.462 | neutral | None | None | None | None | I |
R/W | 0.342 | ambiguous | 0.2521 | benign | -0.277 | Destabilizing | 0.935 | D | 0.475 | neutral | None | None | None | None | I |
R/Y | 0.5064 | ambiguous | 0.4113 | ambiguous | 0.14 | Stabilizing | 0.235 | N | 0.457 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.