Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25358 | 76297;76298;76299 | chr2:178570060;178570059;178570058 | chr2:179434787;179434786;179434785 |
N2AB | 23717 | 71374;71375;71376 | chr2:178570060;178570059;178570058 | chr2:179434787;179434786;179434785 |
N2A | 22790 | 68593;68594;68595 | chr2:178570060;178570059;178570058 | chr2:179434787;179434786;179434785 |
N2B | 16293 | 49102;49103;49104 | chr2:178570060;178570059;178570058 | chr2:179434787;179434786;179434785 |
Novex-1 | 16418 | 49477;49478;49479 | chr2:178570060;178570059;178570058 | chr2:179434787;179434786;179434785 |
Novex-2 | 16485 | 49678;49679;49680 | chr2:178570060;178570059;178570058 | chr2:179434787;179434786;179434785 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.013 | N | 0.135 | 0.048 | 0.141422826196 | gnomAD-4.0.0 | 1.59212E-06 | None | None | None | None | N | None | 0 | 2.28728E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1838 | likely_benign | 0.1966 | benign | -1.269 | Destabilizing | 0.345 | N | 0.379 | neutral | None | None | None | None | N |
L/C | 0.4856 | ambiguous | 0.5014 | ambiguous | -0.874 | Destabilizing | 0.991 | D | 0.393 | neutral | None | None | None | None | N |
L/D | 0.7242 | likely_pathogenic | 0.7185 | pathogenic | -0.393 | Destabilizing | 0.39 | N | 0.485 | neutral | None | None | None | None | N |
L/E | 0.445 | ambiguous | 0.4341 | ambiguous | -0.388 | Destabilizing | 0.561 | D | 0.503 | neutral | None | None | None | None | N |
L/F | 0.2049 | likely_benign | 0.209 | benign | -0.721 | Destabilizing | 0.818 | D | 0.43 | neutral | None | None | None | None | N |
L/G | 0.4225 | ambiguous | 0.4331 | ambiguous | -1.57 | Destabilizing | 0.561 | D | 0.476 | neutral | None | None | None | None | N |
L/H | 0.2734 | likely_benign | 0.2565 | benign | -0.658 | Destabilizing | 0.972 | D | 0.511 | neutral | None | None | None | None | N |
L/I | 0.1028 | likely_benign | 0.1112 | benign | -0.533 | Destabilizing | 0.004 | N | 0.24 | neutral | None | None | None | None | N |
L/K | 0.2678 | likely_benign | 0.2474 | benign | -0.842 | Destabilizing | 0.561 | D | 0.467 | neutral | None | None | None | None | N |
L/M | 0.1107 | likely_benign | 0.1249 | benign | -0.551 | Destabilizing | 0.772 | D | 0.457 | neutral | N | 0.473116758 | None | None | N |
L/N | 0.3109 | likely_benign | 0.3342 | benign | -0.721 | Destabilizing | 0.017 | N | 0.412 | neutral | None | None | None | None | N |
L/P | 0.1001 | likely_benign | 0.1 | benign | -0.746 | Destabilizing | 0.001 | N | 0.376 | neutral | N | 0.400942342 | None | None | N |
L/Q | 0.1606 | likely_benign | 0.1481 | benign | -0.848 | Destabilizing | 0.873 | D | 0.469 | neutral | N | 0.494007219 | None | None | N |
L/R | 0.2307 | likely_benign | 0.1956 | benign | -0.306 | Destabilizing | 0.873 | D | 0.459 | neutral | N | 0.445981198 | None | None | N |
L/S | 0.2624 | likely_benign | 0.259 | benign | -1.355 | Destabilizing | 0.39 | N | 0.428 | neutral | None | None | None | None | N |
L/T | 0.1641 | likely_benign | 0.1769 | benign | -1.232 | Destabilizing | 0.007 | N | 0.178 | neutral | None | None | None | None | N |
L/V | 0.0925 | likely_benign | 0.0964 | benign | -0.746 | Destabilizing | 0.013 | N | 0.135 | neutral | N | 0.440116806 | None | None | N |
L/W | 0.4134 | ambiguous | 0.3755 | ambiguous | -0.765 | Destabilizing | 0.991 | D | 0.521 | neutral | None | None | None | None | N |
L/Y | 0.4194 | ambiguous | 0.4233 | ambiguous | -0.546 | Destabilizing | 0.965 | D | 0.41 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.