Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25362 | 76309;76310;76311 | chr2:178570048;178570047;178570046 | chr2:179434775;179434774;179434773 |
N2AB | 23721 | 71386;71387;71388 | chr2:178570048;178570047;178570046 | chr2:179434775;179434774;179434773 |
N2A | 22794 | 68605;68606;68607 | chr2:178570048;178570047;178570046 | chr2:179434775;179434774;179434773 |
N2B | 16297 | 49114;49115;49116 | chr2:178570048;178570047;178570046 | chr2:179434775;179434774;179434773 |
Novex-1 | 16422 | 49489;49490;49491 | chr2:178570048;178570047;178570046 | chr2:179434775;179434774;179434773 |
Novex-2 | 16489 | 49690;49691;49692 | chr2:178570048;178570047;178570046 | chr2:179434775;179434774;179434773 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.988 | N | 0.754 | 0.352 | 0.452640719197 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
L/V | rs1409589701 | None | 0.919 | N | 0.565 | 0.165 | 0.300110245524 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93874E-04 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs1409589701 | None | 0.919 | N | 0.565 | 0.165 | 0.300110245524 | gnomAD-4.0.0 | 6.58354E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93874E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5139 | ambiguous | 0.4668 | ambiguous | -1.968 | Destabilizing | 0.968 | D | 0.627 | neutral | None | None | None | None | N |
L/C | 0.591 | likely_pathogenic | 0.5619 | ambiguous | -1.136 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/D | 0.9072 | likely_pathogenic | 0.8614 | pathogenic | -2.236 | Highly Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
L/E | 0.6459 | likely_pathogenic | 0.5693 | pathogenic | -2.05 | Highly Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | N |
L/F | 0.5017 | ambiguous | 0.4503 | ambiguous | -1.16 | Destabilizing | 0.988 | D | 0.754 | deleterious | N | 0.484318025 | None | None | N |
L/G | 0.6823 | likely_pathogenic | 0.6309 | pathogenic | -2.426 | Highly Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
L/H | 0.5521 | ambiguous | 0.4744 | ambiguous | -1.682 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
L/I | 0.2504 | likely_benign | 0.2381 | benign | -0.675 | Destabilizing | 0.938 | D | 0.509 | neutral | None | None | None | None | N |
L/K | 0.4257 | ambiguous | 0.3544 | ambiguous | -1.542 | Destabilizing | 0.991 | D | 0.758 | deleterious | None | None | None | None | N |
L/M | 0.1559 | likely_benign | 0.1515 | benign | -0.551 | Destabilizing | 0.825 | D | 0.421 | neutral | N | 0.473215209 | None | None | N |
L/N | 0.4578 | ambiguous | 0.3737 | ambiguous | -1.842 | Destabilizing | 0.995 | D | 0.833 | deleterious | None | None | None | None | N |
L/P | 0.572 | likely_pathogenic | 0.4959 | ambiguous | -1.085 | Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | N |
L/Q | 0.2537 | likely_benign | 0.2193 | benign | -1.783 | Destabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | N |
L/R | 0.3389 | likely_benign | 0.2528 | benign | -1.179 | Destabilizing | 0.995 | D | 0.787 | deleterious | None | None | None | None | N |
L/S | 0.6064 | likely_pathogenic | 0.5319 | ambiguous | -2.438 | Highly Destabilizing | 0.988 | D | 0.749 | deleterious | N | 0.521807109 | None | None | N |
L/T | 0.2134 | likely_benign | 0.1915 | benign | -2.12 | Highly Destabilizing | 0.991 | D | 0.753 | deleterious | None | None | None | None | N |
L/V | 0.1913 | likely_benign | 0.176 | benign | -1.085 | Destabilizing | 0.919 | D | 0.565 | neutral | N | 0.469732489 | None | None | N |
L/W | 0.6538 | likely_pathogenic | 0.5419 | ambiguous | -1.483 | Destabilizing | 0.999 | D | 0.803 | deleterious | N | 0.514792543 | None | None | N |
L/Y | 0.7024 | likely_pathogenic | 0.6245 | pathogenic | -1.136 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.