Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25364 | 76315;76316;76317 | chr2:178570042;178570041;178570040 | chr2:179434769;179434768;179434767 |
N2AB | 23723 | 71392;71393;71394 | chr2:178570042;178570041;178570040 | chr2:179434769;179434768;179434767 |
N2A | 22796 | 68611;68612;68613 | chr2:178570042;178570041;178570040 | chr2:179434769;179434768;179434767 |
N2B | 16299 | 49120;49121;49122 | chr2:178570042;178570041;178570040 | chr2:179434769;179434768;179434767 |
Novex-1 | 16424 | 49495;49496;49497 | chr2:178570042;178570041;178570040 | chr2:179434769;179434768;179434767 |
Novex-2 | 16491 | 49696;49697;49698 | chr2:178570042;178570041;178570040 | chr2:179434769;179434768;179434767 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1707567452 | None | 0.963 | N | 0.659 | 0.48 | 0.776506168477 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3088 | likely_benign | 0.3036 | benign | -2.44 | Highly Destabilizing | 0.617 | D | 0.441 | neutral | None | None | None | None | I |
L/C | 0.278 | likely_benign | 0.2653 | benign | -1.524 | Destabilizing | 0.992 | D | 0.529 | neutral | None | None | None | None | I |
L/D | 0.8642 | likely_pathogenic | 0.811 | pathogenic | -2.716 | Highly Destabilizing | 0.972 | D | 0.645 | neutral | None | None | None | None | I |
L/E | 0.5887 | likely_pathogenic | 0.4985 | ambiguous | -2.524 | Highly Destabilizing | 0.92 | D | 0.613 | neutral | None | None | None | None | I |
L/F | 0.0706 | likely_benign | 0.0669 | benign | -1.535 | Destabilizing | 0.002 | N | 0.206 | neutral | None | None | None | None | I |
L/G | 0.5778 | likely_pathogenic | 0.5344 | ambiguous | -2.917 | Highly Destabilizing | 0.92 | D | 0.592 | neutral | None | None | None | None | I |
L/H | 0.1966 | likely_benign | 0.1556 | benign | -2.135 | Highly Destabilizing | 0.85 | D | 0.658 | neutral | None | None | None | None | I |
L/I | 0.1206 | likely_benign | 0.1214 | benign | -1.075 | Destabilizing | 0.447 | N | 0.455 | neutral | None | None | None | None | I |
L/K | 0.4738 | ambiguous | 0.402 | ambiguous | -2.04 | Highly Destabilizing | 0.92 | D | 0.556 | neutral | None | None | None | None | I |
L/M | 0.0887 | likely_benign | 0.0933 | benign | -0.823 | Destabilizing | 0.896 | D | 0.493 | neutral | N | 0.498626392 | None | None | I |
L/N | 0.4865 | ambiguous | 0.4483 | ambiguous | -2.316 | Highly Destabilizing | 0.92 | D | 0.659 | neutral | None | None | None | None | I |
L/P | 0.9655 | likely_pathogenic | 0.9547 | pathogenic | -1.511 | Destabilizing | 0.963 | D | 0.659 | neutral | N | 0.491527409 | None | None | I |
L/Q | 0.1639 | likely_benign | 0.1454 | benign | -2.258 | Highly Destabilizing | 0.963 | D | 0.603 | neutral | N | 0.520599174 | None | None | I |
L/R | 0.3892 | ambiguous | 0.3192 | benign | -1.611 | Destabilizing | 0.896 | D | 0.599 | neutral | N | 0.49102043 | None | None | I |
L/S | 0.3539 | ambiguous | 0.3239 | benign | -2.935 | Highly Destabilizing | 0.92 | D | 0.537 | neutral | None | None | None | None | I |
L/T | 0.3308 | likely_benign | 0.3285 | benign | -2.607 | Highly Destabilizing | 0.92 | D | 0.477 | neutral | None | None | None | None | I |
L/V | 0.1063 | likely_benign | 0.1092 | benign | -1.511 | Destabilizing | 0.379 | N | 0.459 | neutral | N | 0.456312835 | None | None | I |
L/W | 0.2321 | likely_benign | 0.191 | benign | -1.846 | Destabilizing | 0.977 | D | 0.596 | neutral | None | None | None | None | I |
L/Y | 0.1704 | likely_benign | 0.1412 | benign | -1.557 | Destabilizing | 0.005 | N | 0.369 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.