Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25373 | 76342;76343;76344 | chr2:178570015;178570014;178570013 | chr2:179434742;179434741;179434740 |
N2AB | 23732 | 71419;71420;71421 | chr2:178570015;178570014;178570013 | chr2:179434742;179434741;179434740 |
N2A | 22805 | 68638;68639;68640 | chr2:178570015;178570014;178570013 | chr2:179434742;179434741;179434740 |
N2B | 16308 | 49147;49148;49149 | chr2:178570015;178570014;178570013 | chr2:179434742;179434741;179434740 |
Novex-1 | 16433 | 49522;49523;49524 | chr2:178570015;178570014;178570013 | chr2:179434742;179434741;179434740 |
Novex-2 | 16500 | 49723;49724;49725 | chr2:178570015;178570014;178570013 | chr2:179434742;179434741;179434740 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs764739209 | -0.625 | 0.951 | N | 0.376 | 0.246 | 0.251639045875 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
H/Q | rs764739209 | -0.625 | 0.951 | N | 0.376 | 0.246 | 0.251639045875 | gnomAD-4.0.0 | 3.4227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.64048E-05 | 1.65728E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7534 | likely_pathogenic | 0.7357 | pathogenic | -0.751 | Destabilizing | 0.373 | N | 0.329 | neutral | None | None | None | None | N |
H/C | 0.2662 | likely_benign | 0.2732 | benign | 0.222 | Stabilizing | 0.996 | D | 0.488 | neutral | None | None | None | None | N |
H/D | 0.7493 | likely_pathogenic | 0.7405 | pathogenic | -0.755 | Destabilizing | 0.684 | D | 0.361 | neutral | N | 0.484255573 | None | None | N |
H/E | 0.7691 | likely_pathogenic | 0.7319 | pathogenic | -0.641 | Destabilizing | 0.742 | D | 0.325 | neutral | None | None | None | None | N |
H/F | 0.7513 | likely_pathogenic | 0.7232 | pathogenic | 0.603 | Stabilizing | 0.953 | D | 0.38 | neutral | None | None | None | None | N |
H/G | 0.724 | likely_pathogenic | 0.7032 | pathogenic | -1.124 | Destabilizing | 0.59 | D | 0.352 | neutral | None | None | None | None | N |
H/I | 0.8185 | likely_pathogenic | 0.808 | pathogenic | 0.296 | Stabilizing | 0.953 | D | 0.479 | neutral | None | None | None | None | N |
H/K | 0.4443 | ambiguous | 0.4038 | ambiguous | -0.42 | Destabilizing | 0.59 | D | 0.301 | neutral | None | None | None | None | N |
H/L | 0.4819 | ambiguous | 0.4932 | ambiguous | 0.296 | Stabilizing | 0.684 | D | 0.44 | neutral | N | 0.506781728 | None | None | N |
H/M | 0.8448 | likely_pathogenic | 0.8334 | pathogenic | 0.215 | Stabilizing | 0.996 | D | 0.421 | neutral | None | None | None | None | N |
H/N | 0.3241 | likely_benign | 0.3273 | benign | -0.554 | Destabilizing | 0.684 | D | 0.405 | neutral | N | 0.453005958 | None | None | N |
H/P | 0.9264 | likely_pathogenic | 0.9292 | pathogenic | -0.035 | Destabilizing | 0.939 | D | 0.426 | neutral | N | 0.502866807 | None | None | N |
H/Q | 0.442 | ambiguous | 0.4137 | ambiguous | -0.255 | Destabilizing | 0.951 | D | 0.376 | neutral | N | 0.473495874 | None | None | N |
H/R | 0.1339 | likely_benign | 0.1215 | benign | -0.988 | Destabilizing | 0.007 | N | 0.232 | neutral | N | 0.458641064 | None | None | N |
H/S | 0.6346 | likely_pathogenic | 0.6135 | pathogenic | -0.508 | Destabilizing | 0.037 | N | 0.243 | neutral | None | None | None | None | N |
H/T | 0.7252 | likely_pathogenic | 0.6967 | pathogenic | -0.298 | Destabilizing | 0.59 | D | 0.4 | neutral | None | None | None | None | N |
H/V | 0.7315 | likely_pathogenic | 0.7165 | pathogenic | -0.035 | Destabilizing | 0.91 | D | 0.443 | neutral | None | None | None | None | N |
H/W | 0.7304 | likely_pathogenic | 0.7193 | pathogenic | 0.811 | Stabilizing | 0.996 | D | 0.5 | neutral | None | None | None | None | N |
H/Y | 0.3343 | likely_benign | 0.3295 | benign | 0.879 | Stabilizing | 0.979 | D | 0.417 | neutral | N | 0.473659736 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.