Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2538776384;76385;76386 chr2:178569973;178569972;178569971chr2:179434700;179434699;179434698
N2AB2374671461;71462;71463 chr2:178569973;178569972;178569971chr2:179434700;179434699;179434698
N2A2281968680;68681;68682 chr2:178569973;178569972;178569971chr2:179434700;179434699;179434698
N2B1632249189;49190;49191 chr2:178569973;178569972;178569971chr2:179434700;179434699;179434698
Novex-11644749564;49565;49566 chr2:178569973;178569972;178569971chr2:179434700;179434699;179434698
Novex-21651449765;49766;49767 chr2:178569973;178569972;178569971chr2:179434700;179434699;179434698
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-72
  • Domain position: 84
  • Structural Position: 117
  • Q(SASA): 0.4126
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs879225322 None 0.942 N 0.691 0.186 None gnomAD-3.1.2 1.32E-05 None None None None I None 0 0 1.09649E-03 0 0 None 0 0 0 0 4.78011E-04
L/F rs879225322 None 0.942 N 0.691 0.186 None gnomAD-4.0.0 4.3417E-06 None None None None I None 0 0 None 0 0 None 0 0 4.241E-06 0 1.60267E-05
L/I None None 0.058 N 0.296 0.055 0.371344866733 gnomAD-4.0.0 6.84812E-07 None None None None I None 0 0 None 0 0 None 0 0 0 1.16063E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2023 likely_benign 0.2269 benign -1.326 Destabilizing 0.559 D 0.637 neutral None None None None I
L/C 0.3867 ambiguous 0.3992 ambiguous -0.888 Destabilizing 0.998 D 0.732 prob.delet. None None None None I
L/D 0.6659 likely_pathogenic 0.6528 pathogenic -0.525 Destabilizing 0.993 D 0.803 deleterious None None None None I
L/E 0.3921 ambiguous 0.387 ambiguous -0.576 Destabilizing 0.978 D 0.8 deleterious None None None None I
L/F 0.1189 likely_benign 0.1119 benign -1.093 Destabilizing 0.942 D 0.691 prob.neutral N 0.452176452 None None I
L/G 0.4847 ambiguous 0.503 ambiguous -1.569 Destabilizing 0.978 D 0.796 deleterious None None None None I
L/H 0.2422 likely_benign 0.2355 benign -0.682 Destabilizing 0.997 D 0.808 deleterious N 0.507549732 None None I
L/I 0.0756 likely_benign 0.0808 benign -0.768 Destabilizing 0.058 N 0.296 neutral N 0.400824912 None None I
L/K 0.2727 likely_benign 0.2771 benign -0.666 Destabilizing 0.978 D 0.807 deleterious None None None None I
L/M 0.1056 likely_benign 0.1169 benign -0.571 Destabilizing 0.978 D 0.691 prob.neutral None None None None I
L/N 0.3027 likely_benign 0.3137 benign -0.455 Destabilizing 0.993 D 0.809 deleterious None None None None I
L/P 0.2032 likely_benign 0.2246 benign -0.921 Destabilizing 0.99 D 0.805 deleterious N 0.456312835 None None I
L/Q 0.1662 likely_benign 0.17 benign -0.717 Destabilizing 0.993 D 0.809 deleterious None None None None I
L/R 0.2279 likely_benign 0.2125 benign -0.041 Destabilizing 0.97 D 0.807 deleterious N 0.460430576 None None I
L/S 0.2531 likely_benign 0.2649 benign -1.08 Destabilizing 0.978 D 0.778 deleterious None None None None I
L/T 0.1853 likely_benign 0.2043 benign -1.019 Destabilizing 0.86 D 0.684 prob.neutral None None None None I
L/V 0.0776 likely_benign 0.0835 benign -0.921 Destabilizing 0.006 N 0.334 neutral N 0.364845469 None None I
L/W 0.3061 likely_benign 0.2568 benign -1.047 Destabilizing 0.998 D 0.801 deleterious None None None None I
L/Y 0.3151 likely_benign 0.3106 benign -0.819 Destabilizing 0.978 D 0.743 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.