Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25388 | 76387;76388;76389 | chr2:178569970;178569969;178569968 | chr2:179434697;179434696;179434695 |
N2AB | 23747 | 71464;71465;71466 | chr2:178569970;178569969;178569968 | chr2:179434697;179434696;179434695 |
N2A | 22820 | 68683;68684;68685 | chr2:178569970;178569969;178569968 | chr2:179434697;179434696;179434695 |
N2B | 16323 | 49192;49193;49194 | chr2:178569970;178569969;178569968 | chr2:179434697;179434696;179434695 |
Novex-1 | 16448 | 49567;49568;49569 | chr2:178569970;178569969;178569968 | chr2:179434697;179434696;179434695 |
Novex-2 | 16515 | 49768;49769;49770 | chr2:178569970;178569969;178569968 | chr2:179434697;179434696;179434695 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1707543874 | None | 0.939 | N | 0.781 | 0.411 | 0.301455362545 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66354E-05 |
S/T | None | None | 0.815 | N | 0.7 | 0.385 | 0.317958651998 | gnomAD-4.0.0 | 7.20193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.4125 | ambiguous | 0.4088 | ambiguous | -0.762 | Destabilizing | 0.206 | N | 0.565 | neutral | None | None | None | None | N |
S/C | 0.6875 | likely_pathogenic | 0.6939 | pathogenic | -0.842 | Destabilizing | 0.994 | D | 0.763 | deleterious | D | 0.532824801 | None | None | N |
S/D | 0.9833 | likely_pathogenic | 0.9872 | pathogenic | -1.304 | Destabilizing | 0.742 | D | 0.709 | prob.delet. | None | None | None | None | N |
S/E | 0.9947 | likely_pathogenic | 0.9948 | pathogenic | -1.255 | Destabilizing | 0.854 | D | 0.719 | prob.delet. | None | None | None | None | N |
S/F | 0.995 | likely_pathogenic | 0.9943 | pathogenic | -0.8 | Destabilizing | 0.984 | D | 0.806 | deleterious | None | None | None | None | N |
S/G | 0.0661 | likely_benign | 0.0737 | benign | -1.033 | Destabilizing | 0.001 | N | 0.437 | neutral | N | 0.395968092 | None | None | N |
S/H | 0.9867 | likely_pathogenic | 0.9871 | pathogenic | -1.43 | Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
S/I | 0.994 | likely_pathogenic | 0.9939 | pathogenic | -0.13 | Destabilizing | 0.979 | D | 0.819 | deleterious | N | 0.521215006 | None | None | N |
S/K | 0.998 | likely_pathogenic | 0.9983 | pathogenic | -0.862 | Destabilizing | 0.742 | D | 0.726 | prob.delet. | None | None | None | None | N |
S/L | 0.9567 | likely_pathogenic | 0.9482 | pathogenic | -0.13 | Destabilizing | 0.854 | D | 0.795 | deleterious | None | None | None | None | N |
S/M | 0.9776 | likely_pathogenic | 0.9751 | pathogenic | 0.035 | Stabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
S/N | 0.9514 | likely_pathogenic | 0.96 | pathogenic | -1.085 | Destabilizing | 0.684 | D | 0.706 | prob.neutral | D | 0.531810843 | None | None | N |
S/P | 0.99 | likely_pathogenic | 0.9883 | pathogenic | -0.307 | Destabilizing | 0.984 | D | 0.772 | deleterious | None | None | None | None | N |
S/Q | 0.9906 | likely_pathogenic | 0.9909 | pathogenic | -1.234 | Destabilizing | 0.984 | D | 0.726 | prob.delet. | None | None | None | None | N |
S/R | 0.9963 | likely_pathogenic | 0.9963 | pathogenic | -0.741 | Destabilizing | 0.939 | D | 0.781 | deleterious | N | 0.509187137 | None | None | N |
S/T | 0.718 | likely_pathogenic | 0.7557 | pathogenic | -0.947 | Destabilizing | 0.815 | D | 0.7 | prob.neutral | N | 0.512692629 | None | None | N |
S/V | 0.988 | likely_pathogenic | 0.9886 | pathogenic | -0.307 | Destabilizing | 0.953 | D | 0.801 | deleterious | None | None | None | None | N |
S/W | 0.9945 | likely_pathogenic | 0.9931 | pathogenic | -0.852 | Destabilizing | 0.996 | D | 0.85 | deleterious | None | None | None | None | N |
S/Y | 0.9911 | likely_pathogenic | 0.9898 | pathogenic | -0.537 | Destabilizing | 0.984 | D | 0.802 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.