Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25389 | 76390;76391;76392 | chr2:178569967;178569966;178569965 | chr2:179434694;179434693;179434692 |
N2AB | 23748 | 71467;71468;71469 | chr2:178569967;178569966;178569965 | chr2:179434694;179434693;179434692 |
N2A | 22821 | 68686;68687;68688 | chr2:178569967;178569966;178569965 | chr2:179434694;179434693;179434692 |
N2B | 16324 | 49195;49196;49197 | chr2:178569967;178569966;178569965 | chr2:179434694;179434693;179434692 |
Novex-1 | 16449 | 49570;49571;49572 | chr2:178569967;178569966;178569965 | chr2:179434694;179434693;179434692 |
Novex-2 | 16516 | 49771;49772;49773 | chr2:178569967;178569966;178569965 | chr2:179434694;179434693;179434692 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs371435213 | -0.039 | 0.447 | N | 0.431 | 0.115 | 0.297031009988 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs371435213 | -0.039 | 0.447 | N | 0.431 | 0.115 | 0.297031009988 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs371435213 | -0.039 | 0.447 | N | 0.431 | 0.115 | 0.297031009988 | gnomAD-4.0.0 | 6.57834E-06 | None | None | None | None | I | None | 2.41359E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | None | None | 0.491 | N | 0.464 | 0.209 | 0.303453137403 | gnomAD-4.0.0 | 1.59487E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86535E-06 | 0 | 0 |
E/K | None | None | 0.005 | N | 0.151 | 0.113 | 0.229924730088 | gnomAD-4.0.0 | 1.59537E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8662E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.089 | likely_benign | 0.0903 | benign | -0.469 | Destabilizing | 0.005 | N | 0.21 | neutral | N | 0.504685572 | None | None | I |
E/C | 0.64 | likely_pathogenic | 0.6836 | pathogenic | -0.053 | Destabilizing | 0.991 | D | 0.457 | neutral | None | None | None | None | I |
E/D | 0.0957 | likely_benign | 0.1028 | benign | -0.322 | Destabilizing | 0.447 | N | 0.431 | neutral | N | 0.487601321 | None | None | I |
E/F | 0.5192 | ambiguous | 0.5335 | ambiguous | -0.355 | Destabilizing | 0.965 | D | 0.473 | neutral | None | None | None | None | I |
E/G | 0.1225 | likely_benign | 0.1212 | benign | -0.648 | Destabilizing | 0.491 | N | 0.464 | neutral | N | 0.483863952 | None | None | I |
E/H | 0.3247 | likely_benign | 0.3264 | benign | -0.099 | Destabilizing | 0.965 | D | 0.508 | neutral | None | None | None | None | I |
E/I | 0.1723 | likely_benign | 0.1915 | benign | -0.036 | Destabilizing | 0.818 | D | 0.517 | neutral | None | None | None | None | I |
E/K | 0.0859 | likely_benign | 0.0816 | benign | 0.35 | Stabilizing | 0.005 | N | 0.151 | neutral | N | 0.488428041 | None | None | I |
E/L | 0.1783 | likely_benign | 0.1813 | benign | -0.036 | Destabilizing | 0.561 | D | 0.487 | neutral | None | None | None | None | I |
E/M | 0.2442 | likely_benign | 0.2538 | benign | 0.107 | Stabilizing | 0.965 | D | 0.469 | neutral | None | None | None | None | I |
E/N | 0.1554 | likely_benign | 0.1644 | benign | -0.014 | Destabilizing | 0.722 | D | 0.515 | neutral | None | None | None | None | I |
E/P | 0.2528 | likely_benign | 0.2676 | benign | -0.161 | Destabilizing | 0.004 | N | 0.271 | neutral | None | None | None | None | I |
E/Q | 0.0975 | likely_benign | 0.0945 | benign | 0.021 | Stabilizing | 0.491 | N | 0.539 | neutral | N | 0.473613304 | None | None | I |
E/R | 0.1675 | likely_benign | 0.1564 | benign | 0.518 | Stabilizing | 0.39 | N | 0.459 | neutral | None | None | None | None | I |
E/S | 0.1245 | likely_benign | 0.127 | benign | -0.151 | Destabilizing | 0.209 | N | 0.422 | neutral | None | None | None | None | I |
E/T | 0.135 | likely_benign | 0.1426 | benign | 0.003 | Stabilizing | 0.007 | N | 0.2 | neutral | None | None | None | None | I |
E/V | 0.1113 | likely_benign | 0.1166 | benign | -0.161 | Destabilizing | 0.491 | N | 0.476 | neutral | N | 0.478650166 | None | None | I |
E/W | 0.8155 | likely_pathogenic | 0.81 | pathogenic | -0.189 | Destabilizing | 0.991 | D | 0.532 | neutral | None | None | None | None | I |
E/Y | 0.4123 | ambiguous | 0.4309 | ambiguous | -0.113 | Destabilizing | 0.965 | D | 0.485 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.