Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25392 | 76399;76400;76401 | chr2:178569958;178569957;178569956 | chr2:179434685;179434684;179434683 |
N2AB | 23751 | 71476;71477;71478 | chr2:178569958;178569957;178569956 | chr2:179434685;179434684;179434683 |
N2A | 22824 | 68695;68696;68697 | chr2:178569958;178569957;178569956 | chr2:179434685;179434684;179434683 |
N2B | 16327 | 49204;49205;49206 | chr2:178569958;178569957;178569956 | chr2:179434685;179434684;179434683 |
Novex-1 | 16452 | 49579;49580;49581 | chr2:178569958;178569957;178569956 | chr2:179434685;179434684;179434683 |
Novex-2 | 16519 | 49780;49781;49782 | chr2:178569958;178569957;178569956 | chr2:179434685;179434684;179434683 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | None | None | 0.162 | N | 0.395 | 0.182 | 0.165133752707 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.053 | likely_benign | 0.0546 | benign | -1.049 | Destabilizing | None | N | 0.215 | neutral | N | 0.440516663 | None | None | I |
P/C | 0.2252 | likely_benign | 0.2351 | benign | -0.704 | Destabilizing | 0.747 | D | 0.363 | neutral | None | None | None | None | I |
P/D | 0.2226 | likely_benign | 0.2083 | benign | -0.802 | Destabilizing | 0.018 | N | 0.395 | neutral | None | None | None | None | I |
P/E | 0.1336 | likely_benign | 0.1252 | benign | -0.903 | Destabilizing | None | N | 0.286 | neutral | None | None | None | None | I |
P/F | 0.1668 | likely_benign | 0.1629 | benign | -1.159 | Destabilizing | 0.06 | N | 0.444 | neutral | None | None | None | None | I |
P/G | 0.1714 | likely_benign | 0.1702 | benign | -1.234 | Destabilizing | 0.015 | N | 0.277 | neutral | None | None | None | None | I |
P/H | 0.1159 | likely_benign | 0.1078 | benign | -0.728 | Destabilizing | 0.162 | N | 0.395 | neutral | N | 0.474656786 | None | None | I |
P/I | 0.0949 | likely_benign | 0.0997 | benign | -0.688 | Destabilizing | 0.018 | N | 0.511 | neutral | None | None | None | None | I |
P/K | 0.1386 | likely_benign | 0.128 | benign | -0.749 | Destabilizing | None | N | 0.299 | neutral | None | None | None | None | I |
P/L | 0.0523 | likely_benign | 0.054 | benign | -0.688 | Destabilizing | None | N | 0.306 | neutral | N | 0.463470881 | None | None | I |
P/M | 0.1139 | likely_benign | 0.1209 | benign | -0.428 | Destabilizing | 0.06 | N | 0.401 | neutral | None | None | None | None | I |
P/N | 0.1503 | likely_benign | 0.152 | benign | -0.434 | Destabilizing | 0.035 | N | 0.513 | neutral | None | None | None | None | I |
P/Q | 0.0832 | likely_benign | 0.0786 | benign | -0.751 | Destabilizing | 0.001 | N | 0.255 | neutral | None | None | None | None | I |
P/R | 0.1208 | likely_benign | 0.1077 | benign | -0.128 | Destabilizing | 0.013 | N | 0.449 | neutral | N | 0.491676203 | None | None | I |
P/S | 0.0733 | likely_benign | 0.0709 | benign | -0.855 | Destabilizing | 0.001 | N | 0.298 | neutral | N | 0.46577768 | None | None | I |
P/T | 0.0688 | likely_benign | 0.07 | benign | -0.862 | Destabilizing | 0.006 | N | 0.341 | neutral | N | 0.493310998 | None | None | I |
P/V | 0.0761 | likely_benign | 0.0804 | benign | -0.773 | Destabilizing | 0.007 | N | 0.285 | neutral | None | None | None | None | I |
P/W | 0.3414 | ambiguous | 0.3135 | benign | -1.199 | Destabilizing | 0.747 | D | 0.455 | neutral | None | None | None | None | I |
P/Y | 0.1937 | likely_benign | 0.1839 | benign | -0.924 | Destabilizing | 0.204 | N | 0.439 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.