Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25398 | 76417;76418;76419 | chr2:178569940;178569939;178569938 | chr2:179434667;179434666;179434665 |
N2AB | 23757 | 71494;71495;71496 | chr2:178569940;178569939;178569938 | chr2:179434667;179434666;179434665 |
N2A | 22830 | 68713;68714;68715 | chr2:178569940;178569939;178569938 | chr2:179434667;179434666;179434665 |
N2B | 16333 | 49222;49223;49224 | chr2:178569940;178569939;178569938 | chr2:179434667;179434666;179434665 |
Novex-1 | 16458 | 49597;49598;49599 | chr2:178569940;178569939;178569938 | chr2:179434667;179434666;179434665 |
Novex-2 | 16525 | 49798;49799;49800 | chr2:178569940;178569939;178569938 | chr2:179434667;179434666;179434665 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | None | None | 0.997 | N | 0.685 | 0.293 | 0.284539287134 | gnomAD-4.0.0 | 1.5933E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86175E-06 | 0 | 0 |
K/R | rs1467808986 | 0.198 | 0.027 | N | 0.359 | 0.066 | 0.218845423259 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
K/R | rs1467808986 | 0.198 | 0.027 | N | 0.359 | 0.066 | 0.218845423259 | gnomAD-4.0.0 | 1.5933E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78025E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5021 | ambiguous | 0.5172 | ambiguous | -0.452 | Destabilizing | 0.717 | D | 0.56 | neutral | None | None | None | None | N |
K/C | 0.7297 | likely_pathogenic | 0.7662 | pathogenic | -0.379 | Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
K/D | 0.8896 | likely_pathogenic | 0.8954 | pathogenic | -0.412 | Destabilizing | 0.947 | D | 0.581 | neutral | None | None | None | None | N |
K/E | 0.3679 | ambiguous | 0.3603 | ambiguous | -0.329 | Destabilizing | 0.792 | D | 0.519 | neutral | N | 0.501583765 | None | None | N |
K/F | 0.8245 | likely_pathogenic | 0.8259 | pathogenic | -0.254 | Destabilizing | 0.973 | D | 0.809 | deleterious | None | None | None | None | N |
K/G | 0.7441 | likely_pathogenic | 0.7768 | pathogenic | -0.805 | Destabilizing | 0.835 | D | 0.592 | neutral | None | None | None | None | N |
K/H | 0.3671 | ambiguous | 0.3736 | ambiguous | -1.266 | Destabilizing | 0.998 | D | 0.69 | prob.delet. | None | None | None | None | N |
K/I | 0.403 | ambiguous | 0.3934 | ambiguous | 0.452 | Stabilizing | 0.947 | D | 0.809 | deleterious | None | None | None | None | N |
K/L | 0.4558 | ambiguous | 0.4353 | ambiguous | 0.452 | Stabilizing | 0.717 | D | 0.607 | neutral | None | None | None | None | N |
K/M | 0.2916 | likely_benign | 0.28 | benign | 0.486 | Stabilizing | 0.997 | D | 0.685 | prob.delet. | N | 0.516398502 | None | None | N |
K/N | 0.684 | likely_pathogenic | 0.6929 | pathogenic | -0.443 | Destabilizing | 0.931 | D | 0.554 | neutral | N | 0.484238665 | None | None | N |
K/P | 0.7941 | likely_pathogenic | 0.7975 | pathogenic | 0.181 | Stabilizing | 0.973 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/Q | 0.1837 | likely_benign | 0.1828 | benign | -0.568 | Destabilizing | 0.931 | D | 0.591 | neutral | N | 0.511550042 | None | None | N |
K/R | 0.0823 | likely_benign | 0.0858 | benign | -0.64 | Destabilizing | 0.027 | N | 0.359 | neutral | N | 0.48417144 | None | None | N |
K/S | 0.6804 | likely_pathogenic | 0.7013 | pathogenic | -1.0 | Destabilizing | 0.717 | D | 0.469 | neutral | None | None | None | None | N |
K/T | 0.2677 | likely_benign | 0.2765 | benign | -0.724 | Destabilizing | 0.027 | N | 0.467 | neutral | N | 0.449335643 | None | None | N |
K/V | 0.3742 | ambiguous | 0.3661 | ambiguous | 0.181 | Stabilizing | 0.899 | D | 0.545 | neutral | None | None | None | None | N |
K/W | 0.8156 | likely_pathogenic | 0.8302 | pathogenic | -0.176 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
K/Y | 0.7123 | likely_pathogenic | 0.7168 | pathogenic | 0.129 | Stabilizing | 0.991 | D | 0.831 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.