Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25408 | 76447;76448;76449 | chr2:178569910;178569909;178569908 | chr2:179434637;179434636;179434635 |
N2AB | 23767 | 71524;71525;71526 | chr2:178569910;178569909;178569908 | chr2:179434637;179434636;179434635 |
N2A | 22840 | 68743;68744;68745 | chr2:178569910;178569909;178569908 | chr2:179434637;179434636;179434635 |
N2B | 16343 | 49252;49253;49254 | chr2:178569910;178569909;178569908 | chr2:179434637;179434636;179434635 |
Novex-1 | 16468 | 49627;49628;49629 | chr2:178569910;178569909;178569908 | chr2:179434637;179434636;179434635 |
Novex-2 | 16535 | 49828;49829;49830 | chr2:178569910;178569909;178569908 | chr2:179434637;179434636;179434635 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | None | None | 1.0 | D | 0.899 | 0.454 | 0.563728453957 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
P/L | None | None | 1.0 | N | 0.895 | 0.442 | 0.648735566516 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1365 | likely_benign | 0.168 | benign | -1.476 | Destabilizing | 1.0 | D | 0.838 | deleterious | N | 0.496561947 | None | None | N |
P/C | 0.7237 | likely_pathogenic | 0.7503 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/D | 0.9402 | likely_pathogenic | 0.9665 | pathogenic | -1.792 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
P/E | 0.7521 | likely_pathogenic | 0.8327 | pathogenic | -1.843 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
P/F | 0.7768 | likely_pathogenic | 0.8375 | pathogenic | -1.348 | Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
P/G | 0.7243 | likely_pathogenic | 0.7859 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/H | 0.5652 | likely_pathogenic | 0.642 | pathogenic | -1.302 | Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.537067989 | None | None | N |
P/I | 0.5886 | likely_pathogenic | 0.6814 | pathogenic | -0.865 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
P/K | 0.6619 | likely_pathogenic | 0.7437 | pathogenic | -1.194 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
P/L | 0.3068 | likely_benign | 0.3925 | ambiguous | -0.865 | Destabilizing | 1.0 | D | 0.895 | deleterious | N | 0.513937305 | None | None | N |
P/M | 0.5668 | likely_pathogenic | 0.6496 | pathogenic | -0.555 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
P/N | 0.8173 | likely_pathogenic | 0.8789 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
P/Q | 0.4367 | ambiguous | 0.5147 | ambiguous | -1.213 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/R | 0.5147 | ambiguous | 0.5872 | pathogenic | -0.587 | Destabilizing | 1.0 | D | 0.911 | deleterious | N | 0.512669857 | None | None | N |
P/S | 0.3551 | ambiguous | 0.454 | ambiguous | -1.311 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.489196778 | None | None | N |
P/T | 0.3859 | ambiguous | 0.5064 | ambiguous | -1.274 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.50684696 | None | None | N |
P/V | 0.4615 | ambiguous | 0.5512 | ambiguous | -1.036 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/W | 0.9308 | likely_pathogenic | 0.949 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
P/Y | 0.8043 | likely_pathogenic | 0.8622 | pathogenic | -1.228 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.