Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25413 | 76462;76463;76464 | chr2:178569895;178569894;178569893 | chr2:179434622;179434621;179434620 |
N2AB | 23772 | 71539;71540;71541 | chr2:178569895;178569894;178569893 | chr2:179434622;179434621;179434620 |
N2A | 22845 | 68758;68759;68760 | chr2:178569895;178569894;178569893 | chr2:179434622;179434621;179434620 |
N2B | 16348 | 49267;49268;49269 | chr2:178569895;178569894;178569893 | chr2:179434622;179434621;179434620 |
Novex-1 | 16473 | 49642;49643;49644 | chr2:178569895;178569894;178569893 | chr2:179434622;179434621;179434620 |
Novex-2 | 16540 | 49843;49844;49845 | chr2:178569895;178569894;178569893 | chr2:179434622;179434621;179434620 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.001 | N | 0.335 | 0.178 | 0.257786959452 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/R | rs367696053 | -0.074 | 0.001 | N | 0.206 | 0.079 | None | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/R | rs367696053 | -0.074 | 0.001 | N | 0.206 | 0.079 | None | gnomAD-4.0.0 | 2.05305E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.437 | ambiguous | 0.432 | ambiguous | -0.55 | Destabilizing | 0.272 | N | 0.616 | neutral | None | None | None | None | N |
K/C | 0.5714 | likely_pathogenic | 0.6586 | pathogenic | -0.667 | Destabilizing | 0.968 | D | 0.783 | deleterious | None | None | None | None | N |
K/D | 0.7577 | likely_pathogenic | 0.7406 | pathogenic | -0.143 | Destabilizing | 0.157 | N | 0.648 | neutral | None | None | None | None | N |
K/E | 0.2691 | likely_benign | 0.2533 | benign | 0.001 | Stabilizing | 0.001 | N | 0.335 | neutral | N | 0.495586086 | None | None | N |
K/F | 0.7756 | likely_pathogenic | 0.7994 | pathogenic | -0.087 | Destabilizing | 0.726 | D | 0.774 | deleterious | None | None | None | None | N |
K/G | 0.5781 | likely_pathogenic | 0.5842 | pathogenic | -0.944 | Destabilizing | 0.272 | N | 0.636 | neutral | None | None | None | None | N |
K/H | 0.2523 | likely_benign | 0.2817 | benign | -1.205 | Destabilizing | 0.909 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/I | 0.4154 | ambiguous | 0.4486 | ambiguous | 0.482 | Stabilizing | 0.667 | D | 0.781 | deleterious | N | 0.480905119 | None | None | N |
K/L | 0.4543 | ambiguous | 0.4658 | ambiguous | 0.482 | Stabilizing | 0.567 | D | 0.632 | neutral | None | None | None | None | N |
K/M | 0.3156 | likely_benign | 0.317 | benign | 0.184 | Stabilizing | 0.968 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/N | 0.5622 | ambiguous | 0.5645 | pathogenic | -0.66 | Destabilizing | 0.497 | N | 0.583 | neutral | N | 0.472991854 | None | None | N |
K/P | 0.9673 | likely_pathogenic | 0.9645 | pathogenic | 0.168 | Stabilizing | 0.726 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/Q | 0.1469 | likely_benign | 0.1504 | benign | -0.619 | Destabilizing | 0.331 | N | 0.585 | neutral | N | 0.501357265 | None | None | N |
K/R | 0.0653 | likely_benign | 0.0705 | benign | -0.711 | Destabilizing | 0.001 | N | 0.206 | neutral | N | 0.470207639 | None | None | N |
K/S | 0.5039 | ambiguous | 0.5058 | ambiguous | -1.278 | Destabilizing | 0.272 | N | 0.555 | neutral | None | None | None | None | N |
K/T | 0.2423 | likely_benign | 0.2418 | benign | -0.918 | Destabilizing | 0.497 | N | 0.68 | prob.neutral | N | 0.499509039 | None | None | N |
K/V | 0.3448 | ambiguous | 0.3618 | ambiguous | 0.168 | Stabilizing | 0.567 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/W | 0.7238 | likely_pathogenic | 0.7814 | pathogenic | -0.007 | Destabilizing | 0.968 | D | 0.759 | deleterious | None | None | None | None | N |
K/Y | 0.6328 | likely_pathogenic | 0.6737 | pathogenic | 0.278 | Stabilizing | 0.726 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.