Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25422 | 76489;76490;76491 | chr2:178569868;178569867;178569866 | chr2:179434595;179434594;179434593 |
N2AB | 23781 | 71566;71567;71568 | chr2:178569868;178569867;178569866 | chr2:179434595;179434594;179434593 |
N2A | 22854 | 68785;68786;68787 | chr2:178569868;178569867;178569866 | chr2:179434595;179434594;179434593 |
N2B | 16357 | 49294;49295;49296 | chr2:178569868;178569867;178569866 | chr2:179434595;179434594;179434593 |
Novex-1 | 16482 | 49669;49670;49671 | chr2:178569868;178569867;178569866 | chr2:179434595;179434594;179434593 |
Novex-2 | 16549 | 49870;49871;49872 | chr2:178569868;178569867;178569866 | chr2:179434595;179434594;179434593 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs751917176 | 0.075 | 0.973 | N | 0.597 | 0.267 | 0.437207349437 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
V/L | rs751917176 | 0.075 | 0.973 | N | 0.597 | 0.267 | 0.437207349437 | gnomAD-4.0.0 | 2.73731E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79914E-06 | 2.31911E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.305 | likely_benign | 0.2927 | benign | -2.086 | Highly Destabilizing | 0.543 | D | 0.313 | neutral | N | 0.515739567 | None | None | N |
V/C | 0.8326 | likely_pathogenic | 0.8164 | pathogenic | -1.026 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/D | 0.9931 | likely_pathogenic | 0.9912 | pathogenic | -2.791 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
V/E | 0.9847 | likely_pathogenic | 0.9833 | pathogenic | -2.449 | Highly Destabilizing | 0.998 | D | 0.829 | deleterious | N | 0.513899808 | None | None | N |
V/F | 0.675 | likely_pathogenic | 0.6291 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/G | 0.7148 | likely_pathogenic | 0.6721 | pathogenic | -2.702 | Highly Destabilizing | 0.997 | D | 0.773 | deleterious | D | 0.525256114 | None | None | N |
V/H | 0.9925 | likely_pathogenic | 0.9903 | pathogenic | -2.706 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/I | 0.0827 | likely_benign | 0.084 | benign | -0.272 | Destabilizing | 0.987 | D | 0.535 | neutral | N | 0.465905393 | None | None | N |
V/K | 0.9877 | likely_pathogenic | 0.9855 | pathogenic | -1.331 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
V/L | 0.3272 | likely_benign | 0.3169 | benign | -0.272 | Destabilizing | 0.973 | D | 0.597 | neutral | N | 0.457048467 | None | None | N |
V/M | 0.3617 | ambiguous | 0.3515 | ambiguous | -0.518 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/N | 0.9688 | likely_pathogenic | 0.9636 | pathogenic | -2.113 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/P | 0.9864 | likely_pathogenic | 0.981 | pathogenic | -0.861 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
V/Q | 0.9777 | likely_pathogenic | 0.9746 | pathogenic | -1.647 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/R | 0.9756 | likely_pathogenic | 0.9699 | pathogenic | -1.744 | Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | N |
V/S | 0.7767 | likely_pathogenic | 0.7598 | pathogenic | -2.513 | Highly Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
V/T | 0.6105 | likely_pathogenic | 0.5942 | pathogenic | -2.002 | Highly Destabilizing | 0.992 | D | 0.643 | neutral | None | None | None | None | N |
V/W | 0.9952 | likely_pathogenic | 0.9932 | pathogenic | -1.547 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
V/Y | 0.9644 | likely_pathogenic | 0.9539 | pathogenic | -1.281 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.