Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25423 | 76492;76493;76494 | chr2:178569865;178569864;178569863 | chr2:179434592;179434591;179434590 |
N2AB | 23782 | 71569;71570;71571 | chr2:178569865;178569864;178569863 | chr2:179434592;179434591;179434590 |
N2A | 22855 | 68788;68789;68790 | chr2:178569865;178569864;178569863 | chr2:179434592;179434591;179434590 |
N2B | 16358 | 49297;49298;49299 | chr2:178569865;178569864;178569863 | chr2:179434592;179434591;179434590 |
Novex-1 | 16483 | 49672;49673;49674 | chr2:178569865;178569864;178569863 | chr2:179434592;179434591;179434590 |
Novex-2 | 16550 | 49873;49874;49875 | chr2:178569865;178569864;178569863 | chr2:179434592;179434591;179434590 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1034189654 | None | 0.08 | N | 0.27 | 0.2 | 0.383089235449 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.2732 | likely_benign | 0.2375 | benign | -2.548 | Highly Destabilizing | 0.103 | N | 0.362 | neutral | None | None | None | None | N |
F/C | 0.1577 | likely_benign | 0.1556 | benign | -1.26 | Destabilizing | 0.954 | D | 0.545 | neutral | N | 0.471573076 | None | None | N |
F/D | 0.5925 | likely_pathogenic | 0.5189 | ambiguous | -1.855 | Destabilizing | 0.004 | N | 0.504 | neutral | None | None | None | None | N |
F/E | 0.6329 | likely_pathogenic | 0.5728 | pathogenic | -1.741 | Destabilizing | 0.39 | N | 0.493 | neutral | None | None | None | None | N |
F/G | 0.5784 | likely_pathogenic | 0.5131 | ambiguous | -2.903 | Highly Destabilizing | 0.345 | N | 0.441 | neutral | None | None | None | None | N |
F/H | 0.2857 | likely_benign | 0.2562 | benign | -1.143 | Destabilizing | 0.965 | D | 0.509 | neutral | None | None | None | None | N |
F/I | 0.1094 | likely_benign | 0.0985 | benign | -1.442 | Destabilizing | 0.003 | N | 0.217 | neutral | N | 0.391245423 | None | None | N |
F/K | 0.5291 | ambiguous | 0.4772 | ambiguous | -1.43 | Destabilizing | 0.561 | D | 0.519 | neutral | None | None | None | None | N |
F/L | 0.5254 | ambiguous | 0.4914 | ambiguous | -1.442 | Destabilizing | 0.08 | N | 0.27 | neutral | N | 0.405366727 | None | None | N |
F/M | 0.2761 | likely_benign | 0.266 | benign | -1.06 | Destabilizing | 0.818 | D | 0.456 | neutral | None | None | None | None | N |
F/N | 0.2941 | likely_benign | 0.2649 | benign | -1.551 | Destabilizing | 0.39 | N | 0.511 | neutral | None | None | None | None | N |
F/P | 0.9802 | likely_pathogenic | 0.97 | pathogenic | -1.81 | Destabilizing | 0.722 | D | 0.619 | neutral | None | None | None | None | N |
F/Q | 0.4538 | ambiguous | 0.4123 | ambiguous | -1.666 | Destabilizing | 0.901 | D | 0.619 | neutral | None | None | None | None | N |
F/R | 0.436 | ambiguous | 0.3825 | ambiguous | -0.717 | Destabilizing | 0.901 | D | 0.621 | neutral | None | None | None | None | N |
F/S | 0.1413 | likely_benign | 0.12 | benign | -2.303 | Highly Destabilizing | 0.036 | N | 0.413 | neutral | N | 0.320459974 | None | None | N |
F/T | 0.1812 | likely_benign | 0.1706 | benign | -2.101 | Highly Destabilizing | 0.007 | N | 0.407 | neutral | None | None | None | None | N |
F/V | 0.1127 | likely_benign | 0.1019 | benign | -1.81 | Destabilizing | 0.005 | N | 0.255 | neutral | N | 0.354572547 | None | None | N |
F/W | 0.4366 | ambiguous | 0.4001 | ambiguous | -0.428 | Destabilizing | 0.991 | D | 0.479 | neutral | None | None | None | None | N |
F/Y | 0.109 | likely_benign | 0.103 | benign | -0.683 | Destabilizing | 0.856 | D | 0.405 | neutral | N | 0.460356005 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.