Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25428 | 76507;76508;76509 | chr2:178569850;178569849;178569848 | chr2:179434577;179434576;179434575 |
N2AB | 23787 | 71584;71585;71586 | chr2:178569850;178569849;178569848 | chr2:179434577;179434576;179434575 |
N2A | 22860 | 68803;68804;68805 | chr2:178569850;178569849;178569848 | chr2:179434577;179434576;179434575 |
N2B | 16363 | 49312;49313;49314 | chr2:178569850;178569849;178569848 | chr2:179434577;179434576;179434575 |
Novex-1 | 16488 | 49687;49688;49689 | chr2:178569850;178569849;178569848 | chr2:179434577;179434576;179434575 |
Novex-2 | 16555 | 49888;49889;49890 | chr2:178569850;178569849;178569848 | chr2:179434577;179434576;179434575 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1264945919 | -0.143 | 0.892 | N | 0.557 | 0.205 | 0.210429274316 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
K/R | rs1264945919 | -0.143 | 0.892 | N | 0.557 | 0.205 | 0.210429274316 | gnomAD-4.0.0 | 1.59186E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.8831E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6254 | likely_pathogenic | 0.6127 | pathogenic | -0.334 | Destabilizing | 0.916 | D | 0.601 | neutral | None | None | None | None | N |
K/C | 0.838 | likely_pathogenic | 0.8362 | pathogenic | -0.318 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
K/D | 0.8909 | likely_pathogenic | 0.8835 | pathogenic | -0.027 | Destabilizing | 0.975 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/E | 0.4558 | ambiguous | 0.4471 | ambiguous | 0.053 | Stabilizing | 0.892 | D | 0.511 | neutral | N | 0.495738015 | None | None | N |
K/F | 0.9278 | likely_pathogenic | 0.9169 | pathogenic | -0.226 | Destabilizing | 0.987 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/G | 0.7862 | likely_pathogenic | 0.7759 | pathogenic | -0.642 | Destabilizing | 0.975 | D | 0.65 | neutral | None | None | None | None | N |
K/H | 0.5246 | ambiguous | 0.5211 | ambiguous | -0.967 | Destabilizing | 0.073 | N | 0.396 | neutral | None | None | None | None | N |
K/I | 0.6752 | likely_pathogenic | 0.6524 | pathogenic | 0.435 | Stabilizing | 0.983 | D | 0.724 | prob.delet. | N | 0.489966792 | None | None | N |
K/L | 0.6164 | likely_pathogenic | 0.5927 | pathogenic | 0.435 | Stabilizing | 0.975 | D | 0.645 | neutral | None | None | None | None | N |
K/M | 0.5271 | ambiguous | 0.4985 | ambiguous | 0.191 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/N | 0.799 | likely_pathogenic | 0.7891 | pathogenic | -0.09 | Destabilizing | 0.967 | D | 0.655 | neutral | N | 0.497057136 | None | None | N |
K/P | 0.5923 | likely_pathogenic | 0.5967 | pathogenic | 0.208 | Stabilizing | 0.996 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/Q | 0.2562 | likely_benign | 0.2528 | benign | -0.145 | Destabilizing | 0.967 | D | 0.665 | neutral | N | 0.510784825 | None | None | N |
K/R | 0.0925 | likely_benign | 0.0912 | benign | -0.334 | Destabilizing | 0.892 | D | 0.557 | neutral | N | 0.46339631 | None | None | N |
K/S | 0.7386 | likely_pathogenic | 0.728 | pathogenic | -0.635 | Destabilizing | 0.916 | D | 0.595 | neutral | None | None | None | None | N |
K/T | 0.4828 | ambiguous | 0.4463 | ambiguous | -0.361 | Destabilizing | 0.983 | D | 0.687 | prob.neutral | N | 0.468317365 | None | None | N |
K/V | 0.6047 | likely_pathogenic | 0.5849 | pathogenic | 0.208 | Stabilizing | 0.987 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/W | 0.9233 | likely_pathogenic | 0.9093 | pathogenic | -0.185 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
K/Y | 0.8456 | likely_pathogenic | 0.8323 | pathogenic | 0.122 | Stabilizing | 0.95 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.