Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25439 | 76540;76541;76542 | chr2:178569817;178569816;178569815 | chr2:179434544;179434543;179434542 |
N2AB | 23798 | 71617;71618;71619 | chr2:178569817;178569816;178569815 | chr2:179434544;179434543;179434542 |
N2A | 22871 | 68836;68837;68838 | chr2:178569817;178569816;178569815 | chr2:179434544;179434543;179434542 |
N2B | 16374 | 49345;49346;49347 | chr2:178569817;178569816;178569815 | chr2:179434544;179434543;179434542 |
Novex-1 | 16499 | 49720;49721;49722 | chr2:178569817;178569816;178569815 | chr2:179434544;179434543;179434542 |
Novex-2 | 16566 | 49921;49922;49923 | chr2:178569817;178569816;178569815 | chr2:179434544;179434543;179434542 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.999 | N | 0.882 | 0.386 | 0.517819333224 | gnomAD-4.0.0 | 1.59198E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85923E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3385 | likely_benign | 0.2621 | benign | -0.612 | Destabilizing | 0.619 | D | 0.385 | neutral | N | 0.515318279 | None | None | N |
G/C | 0.5877 | likely_pathogenic | 0.5353 | ambiguous | -0.939 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
G/D | 0.8874 | likely_pathogenic | 0.879 | pathogenic | -1.224 | Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
G/E | 0.8992 | likely_pathogenic | 0.8987 | pathogenic | -1.174 | Destabilizing | 0.998 | D | 0.857 | deleterious | N | 0.472104983 | None | None | N |
G/F | 0.9547 | likely_pathogenic | 0.9435 | pathogenic | -0.674 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
G/H | 0.8758 | likely_pathogenic | 0.8627 | pathogenic | -1.355 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/I | 0.9518 | likely_pathogenic | 0.9384 | pathogenic | 0.084 | Stabilizing | 0.999 | D | 0.894 | deleterious | None | None | None | None | N |
G/K | 0.924 | likely_pathogenic | 0.9357 | pathogenic | -0.893 | Destabilizing | 0.998 | D | 0.862 | deleterious | None | None | None | None | N |
G/L | 0.9337 | likely_pathogenic | 0.9167 | pathogenic | 0.084 | Stabilizing | 0.998 | D | 0.863 | deleterious | None | None | None | None | N |
G/M | 0.928 | likely_pathogenic | 0.9133 | pathogenic | -0.18 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
G/N | 0.7718 | likely_pathogenic | 0.7752 | pathogenic | -0.814 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | N |
G/P | 0.9989 | likely_pathogenic | 0.9984 | pathogenic | -0.105 | Destabilizing | 0.999 | D | 0.866 | deleterious | None | None | None | None | N |
G/Q | 0.8508 | likely_pathogenic | 0.8573 | pathogenic | -0.838 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
G/R | 0.8489 | likely_pathogenic | 0.8638 | pathogenic | -0.869 | Destabilizing | 0.999 | D | 0.882 | deleterious | N | 0.475245309 | None | None | N |
G/S | 0.242 | likely_benign | 0.2162 | benign | -1.177 | Destabilizing | 0.935 | D | 0.388 | neutral | None | None | None | None | N |
G/T | 0.6957 | likely_pathogenic | 0.6838 | pathogenic | -1.028 | Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | N |
G/V | 0.8901 | likely_pathogenic | 0.8669 | pathogenic | -0.105 | Destabilizing | 0.998 | D | 0.863 | deleterious | N | 0.500630945 | None | None | N |
G/W | 0.9234 | likely_pathogenic | 0.9044 | pathogenic | -1.201 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
G/Y | 0.8711 | likely_pathogenic | 0.8549 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.