Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25445 | 76558;76559;76560 | chr2:178569799;178569798;178569797 | chr2:179434526;179434525;179434524 |
N2AB | 23804 | 71635;71636;71637 | chr2:178569799;178569798;178569797 | chr2:179434526;179434525;179434524 |
N2A | 22877 | 68854;68855;68856 | chr2:178569799;178569798;178569797 | chr2:179434526;179434525;179434524 |
N2B | 16380 | 49363;49364;49365 | chr2:178569799;178569798;178569797 | chr2:179434526;179434525;179434524 |
Novex-1 | 16505 | 49738;49739;49740 | chr2:178569799;178569798;178569797 | chr2:179434526;179434525;179434524 |
Novex-2 | 16572 | 49939;49940;49941 | chr2:178569799;178569798;178569797 | chr2:179434526;179434525;179434524 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs2154168053 | None | 0.99 | N | 0.727 | 0.381 | 0.686824916271 | gnomAD-4.0.0 | 1.3003E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7092E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3063 | likely_benign | 0.282 | benign | -1.519 | Destabilizing | 0.717 | D | 0.559 | neutral | None | None | None | None | N |
C/D | 0.7337 | likely_pathogenic | 0.6739 | pathogenic | -1.29 | Destabilizing | 0.956 | D | 0.759 | deleterious | None | None | None | None | N |
C/E | 0.6711 | likely_pathogenic | 0.6296 | pathogenic | -1.065 | Destabilizing | 0.915 | D | 0.751 | deleterious | None | None | None | None | N |
C/F | 0.2755 | likely_benign | 0.2736 | benign | -1.04 | Destabilizing | 0.99 | D | 0.727 | prob.delet. | N | 0.501837268 | None | None | N |
C/G | 0.1813 | likely_benign | 0.1528 | benign | -1.841 | Destabilizing | 0.942 | D | 0.751 | deleterious | N | 0.465822149 | None | None | N |
C/H | 0.3751 | ambiguous | 0.3283 | benign | -2.131 | Highly Destabilizing | 0.994 | D | 0.769 | deleterious | None | None | None | None | N |
C/I | 0.5236 | ambiguous | 0.5337 | ambiguous | -0.651 | Destabilizing | 0.978 | D | 0.667 | neutral | None | None | None | None | N |
C/K | 0.4325 | ambiguous | 0.3702 | ambiguous | -0.861 | Destabilizing | 0.915 | D | 0.751 | deleterious | None | None | None | None | N |
C/L | 0.419 | ambiguous | 0.3937 | ambiguous | -0.651 | Destabilizing | 0.86 | D | 0.597 | neutral | None | None | None | None | N |
C/M | 0.4907 | ambiguous | 0.4819 | ambiguous | -0.228 | Destabilizing | 0.994 | D | 0.683 | prob.neutral | None | None | None | None | N |
C/N | 0.3973 | ambiguous | 0.3698 | ambiguous | -1.363 | Destabilizing | 0.956 | D | 0.784 | deleterious | None | None | None | None | N |
C/P | 0.9881 | likely_pathogenic | 0.9781 | pathogenic | -0.92 | Destabilizing | 0.978 | D | 0.793 | deleterious | None | None | None | None | N |
C/Q | 0.3126 | likely_benign | 0.2611 | benign | -0.903 | Destabilizing | 0.16 | N | 0.538 | neutral | None | None | None | None | N |
C/R | 0.1884 | likely_benign | 0.1548 | benign | -1.366 | Destabilizing | 0.89 | D | 0.783 | deleterious | N | 0.415119574 | None | None | N |
C/S | 0.2266 | likely_benign | 0.2165 | benign | -1.631 | Destabilizing | 0.822 | D | 0.639 | neutral | N | 0.488001179 | None | None | N |
C/T | 0.4059 | ambiguous | 0.3931 | ambiguous | -1.237 | Destabilizing | 0.86 | D | 0.645 | neutral | None | None | None | None | N |
C/V | 0.4411 | ambiguous | 0.4412 | ambiguous | -0.92 | Destabilizing | 0.86 | D | 0.647 | neutral | None | None | None | None | N |
C/W | 0.5384 | ambiguous | 0.5242 | ambiguous | -1.46 | Destabilizing | 0.997 | D | 0.725 | prob.delet. | N | 0.49315907 | None | None | N |
C/Y | 0.2623 | likely_benign | 0.2583 | benign | -1.21 | Destabilizing | 0.99 | D | 0.727 | prob.delet. | N | 0.501490551 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.