Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25457 | 76594;76595;76596 | chr2:178569763;178569762;178569761 | chr2:179434490;179434489;179434488 |
N2AB | 23816 | 71671;71672;71673 | chr2:178569763;178569762;178569761 | chr2:179434490;179434489;179434488 |
N2A | 22889 | 68890;68891;68892 | chr2:178569763;178569762;178569761 | chr2:179434490;179434489;179434488 |
N2B | 16392 | 49399;49400;49401 | chr2:178569763;178569762;178569761 | chr2:179434490;179434489;179434488 |
Novex-1 | 16517 | 49774;49775;49776 | chr2:178569763;178569762;178569761 | chr2:179434490;179434489;179434488 |
Novex-2 | 16584 | 49975;49976;49977 | chr2:178569763;178569762;178569761 | chr2:179434490;179434489;179434488 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.414 | N | 0.334 | 0.366 | 0.327686398923 | gnomAD-4.0.0 | 1.59254E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85927E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1092 | likely_benign | 0.1112 | benign | -0.846 | Destabilizing | 0.919 | D | 0.527 | neutral | N | 0.48318251 | None | None | N |
P/C | 0.5691 | likely_pathogenic | 0.5858 | pathogenic | -0.625 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
P/D | 0.5163 | ambiguous | 0.5302 | ambiguous | -0.499 | Destabilizing | 0.991 | D | 0.641 | neutral | None | None | None | None | N |
P/E | 0.3328 | likely_benign | 0.324 | benign | -0.582 | Destabilizing | 0.991 | D | 0.657 | neutral | None | None | None | None | N |
P/F | 0.4861 | ambiguous | 0.4935 | ambiguous | -0.863 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
P/G | 0.389 | ambiguous | 0.4097 | ambiguous | -1.046 | Destabilizing | 0.938 | D | 0.608 | neutral | None | None | None | None | N |
P/H | 0.2422 | likely_benign | 0.234 | benign | -0.565 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
P/I | 0.3331 | likely_benign | 0.3351 | benign | -0.446 | Destabilizing | 0.995 | D | 0.712 | prob.delet. | None | None | None | None | N |
P/K | 0.3009 | likely_benign | 0.2943 | benign | -0.684 | Destabilizing | 0.991 | D | 0.643 | neutral | None | None | None | None | N |
P/L | 0.1195 | likely_benign | 0.1203 | benign | -0.446 | Destabilizing | 0.988 | D | 0.683 | prob.neutral | N | 0.476722199 | None | None | N |
P/M | 0.3082 | likely_benign | 0.3128 | benign | -0.363 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
P/N | 0.3765 | ambiguous | 0.3915 | ambiguous | -0.393 | Destabilizing | 0.991 | D | 0.669 | neutral | None | None | None | None | N |
P/Q | 0.1821 | likely_benign | 0.1829 | benign | -0.629 | Destabilizing | 0.988 | D | 0.695 | prob.neutral | D | 0.524298414 | None | None | N |
P/R | 0.2468 | likely_benign | 0.2358 | benign | -0.13 | Destabilizing | 0.988 | D | 0.686 | prob.neutral | N | 0.50605937 | None | None | N |
P/S | 0.1399 | likely_benign | 0.1492 | benign | -0.818 | Destabilizing | 0.414 | N | 0.334 | neutral | N | 0.483355869 | None | None | N |
P/T | 0.1397 | likely_benign | 0.1396 | benign | -0.797 | Destabilizing | 0.976 | D | 0.655 | neutral | N | 0.462961954 | None | None | N |
P/V | 0.2396 | likely_benign | 0.2362 | benign | -0.543 | Destabilizing | 0.991 | D | 0.671 | neutral | None | None | None | None | N |
P/W | 0.7312 | likely_pathogenic | 0.7197 | pathogenic | -0.959 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
P/Y | 0.4603 | ambiguous | 0.4541 | ambiguous | -0.672 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.