Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2546 | 7861;7862;7863 | chr2:178773328;178773327;178773326 | chr2:179638055;179638054;179638053 |
N2AB | 2546 | 7861;7862;7863 | chr2:178773328;178773327;178773326 | chr2:179638055;179638054;179638053 |
N2A | 2546 | 7861;7862;7863 | chr2:178773328;178773327;178773326 | chr2:179638055;179638054;179638053 |
N2B | 2500 | 7723;7724;7725 | chr2:178773328;178773327;178773326 | chr2:179638055;179638054;179638053 |
Novex-1 | 2500 | 7723;7724;7725 | chr2:178773328;178773327;178773326 | chr2:179638055;179638054;179638053 |
Novex-2 | 2500 | 7723;7724;7725 | chr2:178773328;178773327;178773326 | chr2:179638055;179638054;179638053 |
Novex-3 | 2546 | 7861;7862;7863 | chr2:178773328;178773327;178773326 | chr2:179638055;179638054;179638053 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.43 | 0.291 | 0.202949470691 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7523 | likely_pathogenic | 0.8245 | pathogenic | -0.359 | Destabilizing | 0.999 | D | 0.604 | neutral | N | 0.515314858 | None | None | N |
E/C | 0.9962 | likely_pathogenic | 0.9975 | pathogenic | None | Stabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/D | 0.8829 | likely_pathogenic | 0.9274 | pathogenic | -0.414 | Destabilizing | 0.999 | D | 0.43 | neutral | N | 0.495982142 | None | None | N |
E/F | 0.9968 | likely_pathogenic | 0.9982 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/G | 0.8195 | likely_pathogenic | 0.863 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.657 | neutral | D | 0.645127718 | None | None | N |
E/H | 0.9855 | likely_pathogenic | 0.9917 | pathogenic | -0.16 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/I | 0.9525 | likely_pathogenic | 0.9729 | pathogenic | 0.202 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/K | 0.7734 | likely_pathogenic | 0.84 | pathogenic | 0.234 | Stabilizing | 0.999 | D | 0.577 | neutral | N | 0.508601681 | None | None | N |
E/L | 0.9767 | likely_pathogenic | 0.9862 | pathogenic | 0.202 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/M | 0.967 | likely_pathogenic | 0.98 | pathogenic | 0.345 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
E/N | 0.9552 | likely_pathogenic | 0.9754 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/P | 0.9642 | likely_pathogenic | 0.9778 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
E/Q | 0.6898 | likely_pathogenic | 0.7824 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.611 | neutral | D | 0.582289623 | None | None | N |
E/R | 0.8962 | likely_pathogenic | 0.9268 | pathogenic | 0.405 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/S | 0.8804 | likely_pathogenic | 0.9288 | pathogenic | -0.233 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
E/T | 0.9265 | likely_pathogenic | 0.9555 | pathogenic | -0.054 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/V | 0.8745 | likely_pathogenic | 0.9212 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.489531362 | None | None | N |
E/W | 0.9991 | likely_pathogenic | 0.9995 | pathogenic | -0.1 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Y | 0.9939 | likely_pathogenic | 0.9967 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.