Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25464 | 76615;76616;76617 | chr2:178569742;178569741;178569740 | chr2:179434469;179434468;179434467 |
N2AB | 23823 | 71692;71693;71694 | chr2:178569742;178569741;178569740 | chr2:179434469;179434468;179434467 |
N2A | 22896 | 68911;68912;68913 | chr2:178569742;178569741;178569740 | chr2:179434469;179434468;179434467 |
N2B | 16399 | 49420;49421;49422 | chr2:178569742;178569741;178569740 | chr2:179434469;179434468;179434467 |
Novex-1 | 16524 | 49795;49796;49797 | chr2:178569742;178569741;178569740 | chr2:179434469;179434468;179434467 |
Novex-2 | 16591 | 49996;49997;49998 | chr2:178569742;178569741;178569740 | chr2:179434469;179434468;179434467 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.997 | N | 0.663 | 0.36 | 0.478755181577 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0936 | likely_benign | 0.0973 | benign | -0.984 | Destabilizing | 0.76 | D | 0.455 | neutral | N | 0.491957212 | None | None | N |
T/C | 0.3013 | likely_benign | 0.3188 | benign | -0.492 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
T/D | 0.4261 | ambiguous | 0.422 | ambiguous | 0.054 | Stabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | N |
T/E | 0.3006 | likely_benign | 0.3111 | benign | 0.156 | Stabilizing | 0.993 | D | 0.618 | neutral | None | None | None | None | N |
T/F | 0.3193 | likely_benign | 0.3341 | benign | -0.98 | Destabilizing | 0.986 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/G | 0.2359 | likely_benign | 0.235 | benign | -1.312 | Destabilizing | 0.993 | D | 0.625 | neutral | None | None | None | None | N |
T/H | 0.2876 | likely_benign | 0.2821 | benign | -1.336 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/I | 0.2062 | likely_benign | 0.2455 | benign | -0.166 | Destabilizing | 0.885 | D | 0.473 | neutral | N | 0.503313517 | None | None | N |
T/K | 0.1534 | likely_benign | 0.1577 | benign | -0.223 | Destabilizing | 0.991 | D | 0.607 | neutral | N | 0.465877239 | None | None | N |
T/L | 0.0872 | likely_benign | 0.0966 | benign | -0.166 | Destabilizing | 0.06 | N | 0.395 | neutral | None | None | None | None | N |
T/M | 0.0796 | likely_benign | 0.0811 | benign | -0.141 | Destabilizing | 0.986 | D | 0.672 | neutral | None | None | None | None | N |
T/N | 0.1025 | likely_benign | 0.0928 | benign | -0.538 | Destabilizing | 0.998 | D | 0.557 | neutral | None | None | None | None | N |
T/P | 0.1032 | likely_benign | 0.1016 | benign | -0.407 | Destabilizing | 0.997 | D | 0.656 | neutral | N | 0.460432736 | None | None | N |
T/Q | 0.1821 | likely_benign | 0.1861 | benign | -0.468 | Destabilizing | 0.998 | D | 0.674 | neutral | None | None | None | None | N |
T/R | 0.1396 | likely_benign | 0.1401 | benign | -0.22 | Destabilizing | 0.997 | D | 0.663 | neutral | N | 0.470370237 | None | None | N |
T/S | 0.1271 | likely_benign | 0.1253 | benign | -0.936 | Destabilizing | 0.969 | D | 0.422 | neutral | N | 0.473003583 | None | None | N |
T/V | 0.1507 | likely_benign | 0.1788 | benign | -0.407 | Destabilizing | 0.06 | N | 0.405 | neutral | None | None | None | None | N |
T/W | 0.6208 | likely_pathogenic | 0.6354 | pathogenic | -0.958 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
T/Y | 0.3019 | likely_benign | 0.3059 | benign | -0.636 | Destabilizing | 0.998 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.