Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25473 | 76642;76643;76644 | chr2:178569715;178569714;178569713 | chr2:179434442;179434441;179434440 |
N2AB | 23832 | 71719;71720;71721 | chr2:178569715;178569714;178569713 | chr2:179434442;179434441;179434440 |
N2A | 22905 | 68938;68939;68940 | chr2:178569715;178569714;178569713 | chr2:179434442;179434441;179434440 |
N2B | 16408 | 49447;49448;49449 | chr2:178569715;178569714;178569713 | chr2:179434442;179434441;179434440 |
Novex-1 | 16533 | 49822;49823;49824 | chr2:178569715;178569714;178569713 | chr2:179434442;179434441;179434440 |
Novex-2 | 16600 | 50023;50024;50025 | chr2:178569715;178569714;178569713 | chr2:179434442;179434441;179434440 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.988 | N | 0.68 | 0.482 | 0.458191732957 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2259 | likely_benign | 0.2196 | benign | -0.805 | Destabilizing | 0.958 | D | 0.649 | neutral | N | 0.520441672 | None | None | N |
E/C | 0.8936 | likely_pathogenic | 0.8978 | pathogenic | -0.426 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/D | 0.2765 | likely_benign | 0.2834 | benign | -0.849 | Destabilizing | 0.067 | N | 0.223 | neutral | N | 0.489766209 | None | None | N |
E/F | 0.8802 | likely_pathogenic | 0.8827 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/G | 0.2264 | likely_benign | 0.2137 | benign | -1.103 | Destabilizing | 0.988 | D | 0.68 | prob.neutral | N | 0.496603064 | None | None | N |
E/H | 0.7006 | likely_pathogenic | 0.6988 | pathogenic | -0.53 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/I | 0.5915 | likely_pathogenic | 0.5767 | pathogenic | -0.012 | Destabilizing | 0.995 | D | 0.798 | deleterious | None | None | None | None | N |
E/K | 0.3342 | likely_benign | 0.3371 | benign | -0.47 | Destabilizing | 0.958 | D | 0.631 | neutral | N | 0.485460568 | None | None | N |
E/L | 0.557 | ambiguous | 0.5431 | ambiguous | -0.012 | Destabilizing | 0.995 | D | 0.773 | deleterious | None | None | None | None | N |
E/M | 0.6451 | likely_pathogenic | 0.6408 | pathogenic | 0.291 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/N | 0.5049 | ambiguous | 0.5064 | ambiguous | -0.823 | Destabilizing | 0.982 | D | 0.761 | deleterious | None | None | None | None | N |
E/P | 0.3673 | ambiguous | 0.3425 | ambiguous | -0.255 | Destabilizing | 0.995 | D | 0.741 | deleterious | None | None | None | None | N |
E/Q | 0.2041 | likely_benign | 0.1935 | benign | -0.745 | Destabilizing | 0.994 | D | 0.736 | prob.delet. | N | 0.482916127 | None | None | N |
E/R | 0.4896 | ambiguous | 0.4818 | ambiguous | -0.161 | Destabilizing | 0.995 | D | 0.745 | deleterious | None | None | None | None | N |
E/S | 0.3439 | ambiguous | 0.3461 | ambiguous | -1.074 | Destabilizing | 0.968 | D | 0.651 | neutral | None | None | None | None | N |
E/T | 0.4199 | ambiguous | 0.4203 | ambiguous | -0.839 | Destabilizing | 0.991 | D | 0.74 | deleterious | None | None | None | None | N |
E/V | 0.3676 | ambiguous | 0.3501 | ambiguous | -0.255 | Destabilizing | 0.994 | D | 0.75 | deleterious | N | 0.486474526 | None | None | N |
E/W | 0.9474 | likely_pathogenic | 0.9484 | pathogenic | -0.194 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/Y | 0.8138 | likely_pathogenic | 0.8206 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.