Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25474 | 76645;76646;76647 | chr2:178569712;178569711;178569710 | chr2:179434439;179434438;179434437 |
N2AB | 23833 | 71722;71723;71724 | chr2:178569712;178569711;178569710 | chr2:179434439;179434438;179434437 |
N2A | 22906 | 68941;68942;68943 | chr2:178569712;178569711;178569710 | chr2:179434439;179434438;179434437 |
N2B | 16409 | 49450;49451;49452 | chr2:178569712;178569711;178569710 | chr2:179434439;179434438;179434437 |
Novex-1 | 16534 | 49825;49826;49827 | chr2:178569712;178569711;178569710 | chr2:179434439;179434438;179434437 |
Novex-2 | 16601 | 50026;50027;50028 | chr2:178569712;178569711;178569710 | chr2:179434439;179434438;179434437 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | rs1707440249 | None | 0.999 | N | 0.7 | 0.441 | 0.322510055762 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/M | rs1707440249 | None | 0.999 | N | 0.7 | 0.441 | 0.322510055762 | gnomAD-4.0.0 | 2.56444E-06 | None | None | None | None | N | None | 3.38352E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs786205301 | 0.078 | 0.967 | N | 0.697 | 0.261 | 0.17258766438 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
K/N | rs786205301 | 0.078 | 0.967 | N | 0.697 | 0.261 | 0.17258766438 | gnomAD-4.0.0 | 1.02677E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.34945E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3663 | ambiguous | 0.3824 | ambiguous | -0.153 | Destabilizing | 0.845 | D | 0.611 | neutral | None | None | None | None | N |
K/C | 0.6039 | likely_pathogenic | 0.6446 | pathogenic | -0.1 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
K/D | 0.3522 | ambiguous | 0.3768 | ambiguous | -0.057 | Destabilizing | 0.975 | D | 0.664 | neutral | None | None | None | None | N |
K/E | 0.198 | likely_benign | 0.21 | benign | 0.008 | Stabilizing | 0.944 | D | 0.632 | neutral | N | 0.459009211 | None | None | N |
K/F | 0.7445 | likely_pathogenic | 0.7668 | pathogenic | 0.027 | Stabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
K/G | 0.2074 | likely_benign | 0.2208 | benign | -0.446 | Destabilizing | 0.033 | N | 0.485 | neutral | None | None | None | None | N |
K/H | 0.247 | likely_benign | 0.2654 | benign | -0.713 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/I | 0.5617 | ambiguous | 0.5782 | pathogenic | 0.578 | Stabilizing | 0.996 | D | 0.767 | deleterious | None | None | None | None | N |
K/L | 0.4134 | ambiguous | 0.4126 | ambiguous | 0.578 | Stabilizing | 0.987 | D | 0.657 | neutral | None | None | None | None | N |
K/M | 0.2579 | likely_benign | 0.2565 | benign | 0.239 | Stabilizing | 0.999 | D | 0.7 | prob.neutral | N | 0.491198987 | None | None | N |
K/N | 0.1813 | likely_benign | 0.1946 | benign | 0.061 | Stabilizing | 0.967 | D | 0.697 | prob.neutral | N | 0.37067815 | None | None | N |
K/P | 0.7528 | likely_pathogenic | 0.7457 | pathogenic | 0.364 | Stabilizing | 0.996 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Q | 0.1366 | likely_benign | 0.1388 | benign | -0.007 | Destabilizing | 0.994 | D | 0.713 | prob.delet. | N | 0.474344022 | None | None | N |
K/R | 0.0962 | likely_benign | 0.0968 | benign | -0.277 | Destabilizing | 0.944 | D | 0.607 | neutral | N | 0.476768252 | None | None | N |
K/S | 0.2986 | likely_benign | 0.3169 | benign | -0.393 | Destabilizing | 0.916 | D | 0.656 | neutral | None | None | None | None | N |
K/T | 0.2078 | likely_benign | 0.2102 | benign | -0.16 | Destabilizing | 0.983 | D | 0.664 | neutral | N | 0.520308386 | None | None | N |
K/V | 0.5125 | ambiguous | 0.5189 | ambiguous | 0.364 | Stabilizing | 0.987 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/W | 0.766 | likely_pathogenic | 0.7692 | pathogenic | 0.028 | Stabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
K/Y | 0.5169 | ambiguous | 0.5407 | ambiguous | 0.305 | Stabilizing | 0.996 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.