Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25481 | 76666;76667;76668 | chr2:178569691;178569690;178569689 | chr2:179434418;179434417;179434416 |
N2AB | 23840 | 71743;71744;71745 | chr2:178569691;178569690;178569689 | chr2:179434418;179434417;179434416 |
N2A | 22913 | 68962;68963;68964 | chr2:178569691;178569690;178569689 | chr2:179434418;179434417;179434416 |
N2B | 16416 | 49471;49472;49473 | chr2:178569691;178569690;178569689 | chr2:179434418;179434417;179434416 |
Novex-1 | 16541 | 49846;49847;49848 | chr2:178569691;178569690;178569689 | chr2:179434418;179434417;179434416 |
Novex-2 | 16608 | 50047;50048;50049 | chr2:178569691;178569690;178569689 | chr2:179434418;179434417;179434416 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1324632548 | None | 0.002 | N | 0.211 | 0.056 | 0.232513804876 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1324632548 | None | 0.002 | N | 0.211 | 0.056 | 0.232513804876 | gnomAD-4.0.0 | 6.57419E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4708E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9415 | likely_pathogenic | 0.961 | pathogenic | -3.042 | Highly Destabilizing | 0.559 | D | 0.614 | neutral | None | None | None | None | N |
I/C | 0.9502 | likely_pathogenic | 0.9592 | pathogenic | -2.583 | Highly Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/D | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | -3.557 | Highly Destabilizing | 0.993 | D | 0.839 | deleterious | None | None | None | None | N |
I/E | 0.9974 | likely_pathogenic | 0.9979 | pathogenic | -3.313 | Highly Destabilizing | 0.978 | D | 0.819 | deleterious | None | None | None | None | N |
I/F | 0.7458 | likely_pathogenic | 0.7832 | pathogenic | -1.609 | Destabilizing | 0.942 | D | 0.639 | neutral | N | 0.514902037 | None | None | N |
I/G | 0.9918 | likely_pathogenic | 0.9941 | pathogenic | -3.51 | Highly Destabilizing | 0.978 | D | 0.793 | deleterious | None | None | None | None | N |
I/H | 0.9962 | likely_pathogenic | 0.9969 | pathogenic | -2.926 | Highly Destabilizing | 0.998 | D | 0.857 | deleterious | None | None | None | None | N |
I/K | 0.9947 | likely_pathogenic | 0.9953 | pathogenic | -2.511 | Highly Destabilizing | 0.978 | D | 0.822 | deleterious | None | None | None | None | N |
I/L | 0.4114 | ambiguous | 0.4696 | ambiguous | -1.621 | Destabilizing | 0.294 | N | 0.311 | neutral | N | 0.469864755 | None | None | N |
I/M | 0.5497 | ambiguous | 0.6053 | pathogenic | -1.883 | Destabilizing | 0.97 | D | 0.635 | neutral | N | 0.503799222 | None | None | N |
I/N | 0.9819 | likely_pathogenic | 0.9857 | pathogenic | -2.981 | Highly Destabilizing | 0.99 | D | 0.853 | deleterious | N | 0.515662506 | None | None | N |
I/P | 0.9954 | likely_pathogenic | 0.9965 | pathogenic | -2.09 | Highly Destabilizing | 0.993 | D | 0.841 | deleterious | None | None | None | None | N |
I/Q | 0.9958 | likely_pathogenic | 0.9966 | pathogenic | -2.758 | Highly Destabilizing | 0.993 | D | 0.858 | deleterious | None | None | None | None | N |
I/R | 0.9915 | likely_pathogenic | 0.9926 | pathogenic | -2.248 | Highly Destabilizing | 0.978 | D | 0.857 | deleterious | None | None | None | None | N |
I/S | 0.9721 | likely_pathogenic | 0.9794 | pathogenic | -3.513 | Highly Destabilizing | 0.97 | D | 0.759 | deleterious | N | 0.504306201 | None | None | N |
I/T | 0.9313 | likely_pathogenic | 0.9527 | pathogenic | -3.161 | Highly Destabilizing | 0.822 | D | 0.557 | neutral | N | 0.515409016 | None | None | N |
I/V | 0.0844 | likely_benign | 0.0912 | benign | -2.09 | Highly Destabilizing | 0.002 | N | 0.211 | neutral | N | 0.360751079 | None | None | N |
I/W | 0.9969 | likely_pathogenic | 0.9972 | pathogenic | -2.012 | Highly Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
I/Y | 0.9795 | likely_pathogenic | 0.9819 | pathogenic | -1.967 | Destabilizing | 0.978 | D | 0.698 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.