Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25484 | 76675;76676;76677 | chr2:178569682;178569681;178569680 | chr2:179434409;179434408;179434407 |
N2AB | 23843 | 71752;71753;71754 | chr2:178569682;178569681;178569680 | chr2:179434409;179434408;179434407 |
N2A | 22916 | 68971;68972;68973 | chr2:178569682;178569681;178569680 | chr2:179434409;179434408;179434407 |
N2B | 16419 | 49480;49481;49482 | chr2:178569682;178569681;178569680 | chr2:179434409;179434408;179434407 |
Novex-1 | 16544 | 49855;49856;49857 | chr2:178569682;178569681;178569680 | chr2:179434409;179434408;179434407 |
Novex-2 | 16611 | 50056;50057;50058 | chr2:178569682;178569681;178569680 | chr2:179434409;179434408;179434407 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1349741599 | None | 0.124 | N | 0.501 | 0.253 | 0.552451585512 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3251 | likely_benign | 0.3277 | benign | -2.382 | Highly Destabilizing | 0.072 | N | 0.463 | neutral | None | None | None | None | N |
I/C | 0.5705 | likely_pathogenic | 0.5555 | ambiguous | -2.105 | Highly Destabilizing | 0.909 | D | 0.565 | neutral | None | None | None | None | N |
I/D | 0.8179 | likely_pathogenic | 0.826 | pathogenic | -2.416 | Highly Destabilizing | 0.726 | D | 0.697 | prob.neutral | None | None | None | None | N |
I/E | 0.6185 | likely_pathogenic | 0.6222 | pathogenic | -2.283 | Highly Destabilizing | 0.726 | D | 0.683 | prob.neutral | None | None | None | None | N |
I/F | 0.1417 | likely_benign | 0.1577 | benign | -1.554 | Destabilizing | 0.497 | N | 0.491 | neutral | N | 0.505397648 | None | None | N |
I/G | 0.6535 | likely_pathogenic | 0.6641 | pathogenic | -2.818 | Highly Destabilizing | 0.726 | D | 0.657 | neutral | None | None | None | None | N |
I/H | 0.5692 | likely_pathogenic | 0.5814 | pathogenic | -2.01 | Highly Destabilizing | 0.968 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/K | 0.3872 | ambiguous | 0.3861 | ambiguous | -1.646 | Destabilizing | 0.726 | D | 0.687 | prob.neutral | None | None | None | None | N |
I/L | 0.0882 | likely_benign | 0.0944 | benign | -1.164 | Destabilizing | 0.025 | N | 0.329 | neutral | N | 0.459315855 | None | None | N |
I/M | 0.0791 | likely_benign | 0.084 | benign | -1.322 | Destabilizing | 0.497 | N | 0.5 | neutral | N | 0.49029491 | None | None | N |
I/N | 0.3882 | ambiguous | 0.4212 | ambiguous | -1.794 | Destabilizing | 0.859 | D | 0.714 | prob.delet. | N | 0.517134794 | None | None | N |
I/P | 0.9644 | likely_pathogenic | 0.967 | pathogenic | -1.547 | Destabilizing | 0.726 | D | 0.697 | prob.neutral | None | None | None | None | N |
I/Q | 0.437 | ambiguous | 0.4512 | ambiguous | -1.845 | Destabilizing | 0.89 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/R | 0.3208 | likely_benign | 0.3137 | benign | -1.215 | Destabilizing | 0.726 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/S | 0.335 | likely_benign | 0.3565 | ambiguous | -2.528 | Highly Destabilizing | 0.497 | N | 0.603 | neutral | N | 0.505571007 | None | None | N |
I/T | 0.2009 | likely_benign | 0.2188 | benign | -2.262 | Highly Destabilizing | 0.124 | N | 0.501 | neutral | N | 0.459067926 | None | None | N |
I/V | 0.0569 | likely_benign | 0.0556 | benign | -1.547 | Destabilizing | None | N | 0.164 | neutral | N | 0.375635679 | None | None | N |
I/W | 0.7441 | likely_pathogenic | 0.7437 | pathogenic | -1.721 | Destabilizing | 0.968 | D | 0.737 | prob.delet. | None | None | None | None | N |
I/Y | 0.4883 | ambiguous | 0.5002 | ambiguous | -1.485 | Destabilizing | 0.726 | D | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.