Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25489 | 76690;76691;76692 | chr2:178569667;178569666;178569665 | chr2:179434394;179434393;179434392 |
N2AB | 23848 | 71767;71768;71769 | chr2:178569667;178569666;178569665 | chr2:179434394;179434393;179434392 |
N2A | 22921 | 68986;68987;68988 | chr2:178569667;178569666;178569665 | chr2:179434394;179434393;179434392 |
N2B | 16424 | 49495;49496;49497 | chr2:178569667;178569666;178569665 | chr2:179434394;179434393;179434392 |
Novex-1 | 16549 | 49870;49871;49872 | chr2:178569667;178569666;178569665 | chr2:179434394;179434393;179434392 |
Novex-2 | 16616 | 50071;50072;50073 | chr2:178569667;178569666;178569665 | chr2:179434394;179434393;179434392 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.967 | N | 0.795 | 0.407 | 0.75040067796 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1285 | likely_benign | 0.145 | benign | -1.036 | Destabilizing | 0.892 | D | 0.639 | neutral | N | 0.476517536 | None | None | I |
V/C | 0.6634 | likely_pathogenic | 0.7025 | pathogenic | -0.808 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | I |
V/D | 0.4696 | ambiguous | 0.5371 | ambiguous | -0.482 | Destabilizing | 0.935 | D | 0.798 | deleterious | N | 0.468633306 | None | None | I |
V/E | 0.307 | likely_benign | 0.372 | ambiguous | -0.552 | Destabilizing | 0.073 | N | 0.519 | neutral | None | None | None | None | I |
V/F | 0.1676 | likely_benign | 0.1981 | benign | -0.957 | Destabilizing | 0.994 | D | 0.831 | deleterious | N | 0.502087984 | None | None | I |
V/G | 0.3068 | likely_benign | 0.3401 | ambiguous | -1.262 | Destabilizing | 0.967 | D | 0.795 | deleterious | N | 0.481115247 | None | None | I |
V/H | 0.5913 | likely_pathogenic | 0.6579 | pathogenic | -0.641 | Destabilizing | 0.997 | D | 0.822 | deleterious | None | None | None | None | I |
V/I | 0.0663 | likely_benign | 0.0684 | benign | -0.559 | Destabilizing | 0.873 | D | 0.579 | neutral | N | 0.493929861 | None | None | I |
V/K | 0.3327 | likely_benign | 0.419 | ambiguous | -0.729 | Destabilizing | 0.95 | D | 0.792 | deleterious | None | None | None | None | I |
V/L | 0.1765 | likely_benign | 0.21 | benign | -0.559 | Destabilizing | 0.773 | D | 0.629 | neutral | N | 0.442231604 | None | None | I |
V/M | 0.1264 | likely_benign | 0.1532 | benign | -0.445 | Destabilizing | 0.996 | D | 0.801 | deleterious | None | None | None | None | I |
V/N | 0.335 | likely_benign | 0.4107 | ambiguous | -0.446 | Destabilizing | 0.975 | D | 0.83 | deleterious | None | None | None | None | I |
V/P | 0.3565 | ambiguous | 0.3965 | ambiguous | -0.682 | Destabilizing | 0.987 | D | 0.835 | deleterious | None | None | None | None | I |
V/Q | 0.3437 | ambiguous | 0.4129 | ambiguous | -0.69 | Destabilizing | 0.95 | D | 0.831 | deleterious | None | None | None | None | I |
V/R | 0.3037 | likely_benign | 0.3732 | ambiguous | -0.15 | Destabilizing | 0.975 | D | 0.833 | deleterious | None | None | None | None | I |
V/S | 0.2347 | likely_benign | 0.2787 | benign | -0.971 | Destabilizing | 0.975 | D | 0.786 | deleterious | None | None | None | None | I |
V/T | 0.1341 | likely_benign | 0.1511 | benign | -0.929 | Destabilizing | 0.916 | D | 0.722 | prob.delet. | None | None | None | None | I |
V/W | 0.7567 | likely_pathogenic | 0.7901 | pathogenic | -1.002 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
V/Y | 0.5273 | ambiguous | 0.5751 | pathogenic | -0.732 | Destabilizing | 0.996 | D | 0.833 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.