Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25494 | 76705;76706;76707 | chr2:178569652;178569651;178569650 | chr2:179434379;179434378;179434377 |
N2AB | 23853 | 71782;71783;71784 | chr2:178569652;178569651;178569650 | chr2:179434379;179434378;179434377 |
N2A | 22926 | 69001;69002;69003 | chr2:178569652;178569651;178569650 | chr2:179434379;179434378;179434377 |
N2B | 16429 | 49510;49511;49512 | chr2:178569652;178569651;178569650 | chr2:179434379;179434378;179434377 |
Novex-1 | 16554 | 49885;49886;49887 | chr2:178569652;178569651;178569650 | chr2:179434379;179434378;179434377 |
Novex-2 | 16621 | 50086;50087;50088 | chr2:178569652;178569651;178569650 | chr2:179434379;179434378;179434377 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs370908118 | -0.417 | 0.964 | N | 0.741 | 0.146 | 0.202949470691 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.72E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1319 | likely_benign | 0.1252 | benign | -0.218 | Destabilizing | 0.974 | D | 0.763 | deleterious | N | 0.462171654 | None | None | N |
D/C | 0.486 | ambiguous | 0.4963 | ambiguous | -0.214 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
D/E | 0.149 | likely_benign | 0.1526 | benign | -0.469 | Destabilizing | 0.964 | D | 0.741 | deleterious | N | 0.421148964 | None | None | N |
D/F | 0.4483 | ambiguous | 0.4524 | ambiguous | 0.39 | Stabilizing | 0.99 | D | 0.859 | deleterious | None | None | None | None | N |
D/G | 0.2225 | likely_benign | 0.2182 | benign | -0.557 | Destabilizing | 0.914 | D | 0.795 | deleterious | N | 0.48539523 | None | None | N |
D/H | 0.2475 | likely_benign | 0.2461 | benign | 0.36 | Stabilizing | 0.149 | N | 0.547 | neutral | N | 0.458249782 | None | None | N |
D/I | 0.2152 | likely_benign | 0.2275 | benign | 0.669 | Stabilizing | 0.99 | D | 0.84 | deleterious | None | None | None | None | N |
D/K | 0.3295 | likely_benign | 0.3471 | ambiguous | -0.079 | Destabilizing | 0.98 | D | 0.763 | deleterious | None | None | None | None | N |
D/L | 0.2555 | likely_benign | 0.2569 | benign | 0.669 | Stabilizing | 0.98 | D | 0.754 | deleterious | None | None | None | None | N |
D/M | 0.4173 | ambiguous | 0.4337 | ambiguous | 0.764 | Stabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
D/N | 0.0852 | likely_benign | 0.0851 | benign | -0.654 | Destabilizing | 0.914 | D | 0.851 | deleterious | N | 0.45308154 | None | None | N |
D/P | 0.5443 | ambiguous | 0.5917 | pathogenic | 0.399 | Stabilizing | 0.997 | D | 0.761 | deleterious | None | None | None | None | N |
D/Q | 0.3122 | likely_benign | 0.3153 | benign | -0.497 | Destabilizing | 0.98 | D | 0.822 | deleterious | None | None | None | None | N |
D/R | 0.3914 | ambiguous | 0.3939 | ambiguous | 0.242 | Stabilizing | 0.98 | D | 0.755 | deleterious | None | None | None | None | N |
D/S | 0.1076 | likely_benign | 0.1067 | benign | -0.839 | Destabilizing | 0.933 | D | 0.832 | deleterious | None | None | None | None | N |
D/T | 0.1748 | likely_benign | 0.183 | benign | -0.554 | Destabilizing | 0.99 | D | 0.773 | deleterious | None | None | None | None | N |
D/V | 0.1281 | likely_benign | 0.1305 | benign | 0.399 | Stabilizing | 0.987 | D | 0.747 | deleterious | N | 0.514640702 | None | None | N |
D/W | 0.8465 | likely_pathogenic | 0.8487 | pathogenic | 0.598 | Stabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
D/Y | 0.1858 | likely_benign | 0.1927 | benign | 0.651 | Stabilizing | 0.949 | D | 0.82 | deleterious | N | 0.461212296 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.