Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25498 | 76717;76718;76719 | chr2:178569640;178569639;178569638 | chr2:179434367;179434366;179434365 |
N2AB | 23857 | 71794;71795;71796 | chr2:178569640;178569639;178569638 | chr2:179434367;179434366;179434365 |
N2A | 22930 | 69013;69014;69015 | chr2:178569640;178569639;178569638 | chr2:179434367;179434366;179434365 |
N2B | 16433 | 49522;49523;49524 | chr2:178569640;178569639;178569638 | chr2:179434367;179434366;179434365 |
Novex-1 | 16558 | 49897;49898;49899 | chr2:178569640;178569639;178569638 | chr2:179434367;179434366;179434365 |
Novex-2 | 16625 | 50098;50099;50100 | chr2:178569640;178569639;178569638 | chr2:179434367;179434366;179434365 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs377754701 | -0.486 | 0.07 | N | 0.265 | 0.087 | 0.223146558224 | gnomAD-2.1.1 | 8.6E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.92886E-04 | None | 0 | 0 | 0 |
P/A | rs377754701 | -0.486 | 0.07 | N | 0.265 | 0.087 | 0.223146558224 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 1.03648E-03 | 0 |
P/A | rs377754701 | -0.486 | 0.07 | N | 0.265 | 0.087 | 0.223146558224 | 1000 genomes | 5.99042E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 3.1E-03 | None |
P/A | rs377754701 | -0.486 | 0.07 | N | 0.265 | 0.087 | 0.223146558224 | gnomAD-4.0.0 | 5.83184E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 9.79292E-04 | 8.01436E-05 |
P/H | rs374426354 | None | 0.947 | N | 0.517 | 0.281 | 0.432266382184 | gnomAD-4.0.0 | 1.37006E-06 | None | None | None | None | N | None | 5.98265E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs374426354 | -0.133 | 0.146 | N | 0.299 | 0.199 | None | gnomAD-2.1.1 | 8.18E-06 | None | None | None | None | N | None | 0 | 2.93E-05 | None | 0 | 0 | None | 0 | None | 0 | 9.07E-06 | 0 |
P/L | rs374426354 | -0.133 | 0.146 | N | 0.299 | 0.199 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
P/L | rs374426354 | -0.133 | 0.146 | N | 0.299 | 0.199 | None | gnomAD-4.0.0 | 1.42696E-05 | None | None | None | None | N | None | 0 | 1.67499E-05 | None | 0 | 0 | None | 0 | 0 | 1.86598E-05 | 0 | 0 |
P/S | rs377754701 | -0.648 | 0.002 | N | 0.177 | 0.078 | None | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 6.59E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs377754701 | -0.648 | 0.002 | N | 0.177 | 0.078 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs377754701 | -0.648 | 0.002 | N | 0.177 | 0.078 | None | gnomAD-4.0.0 | 1.86136E-06 | None | None | None | None | N | None | 4.01016E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | None | None | 0.005 | N | 0.213 | 0.076 | 0.230578612272 | gnomAD-4.0.0 | 7.53565E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.90122E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0641 | likely_benign | 0.0621 | benign | -0.767 | Destabilizing | 0.07 | N | 0.265 | neutral | N | 0.50882945 | None | None | N |
P/C | 0.2568 | likely_benign | 0.2415 | benign | -0.716 | Destabilizing | 0.96 | D | 0.501 | neutral | None | None | None | None | N |
P/D | 0.3495 | ambiguous | 0.2978 | benign | -0.418 | Destabilizing | 0.312 | N | 0.397 | neutral | None | None | None | None | N |
P/E | 0.2233 | likely_benign | 0.1976 | benign | -0.504 | Destabilizing | 0.312 | N | 0.346 | neutral | None | None | None | None | N |
P/F | 0.334 | likely_benign | 0.3098 | benign | -0.774 | Destabilizing | 0.794 | D | 0.649 | prob.neutral | None | None | None | None | N |
P/G | 0.2133 | likely_benign | 0.1888 | benign | -0.958 | Destabilizing | 0.185 | N | 0.317 | neutral | None | None | None | None | N |
P/H | 0.1287 | likely_benign | 0.114 | benign | -0.42 | Destabilizing | 0.947 | D | 0.517 | neutral | N | 0.485597201 | None | None | N |
P/I | 0.2012 | likely_benign | 0.1843 | benign | -0.398 | Destabilizing | 0.355 | N | 0.565 | neutral | None | None | None | None | N |
P/K | 0.1387 | likely_benign | 0.1285 | benign | -0.664 | Destabilizing | 0.002 | N | 0.179 | neutral | None | None | None | None | N |
P/L | 0.1081 | likely_benign | 0.1027 | benign | -0.398 | Destabilizing | 0.146 | N | 0.299 | neutral | N | 0.46069209 | None | None | N |
P/M | 0.2109 | likely_benign | 0.1936 | benign | -0.397 | Destabilizing | 0.041 | N | 0.319 | neutral | None | None | None | None | N |
P/N | 0.1779 | likely_benign | 0.1512 | benign | -0.402 | Destabilizing | 0.524 | D | 0.474 | neutral | None | None | None | None | N |
P/Q | 0.1112 | likely_benign | 0.103 | benign | -0.635 | Destabilizing | 0.524 | D | 0.499 | neutral | None | None | None | None | N |
P/R | 0.116 | likely_benign | 0.1072 | benign | -0.105 | Destabilizing | 0.294 | N | 0.472 | neutral | N | 0.473480427 | None | None | N |
P/S | 0.0924 | likely_benign | 0.0853 | benign | -0.836 | Destabilizing | 0.002 | N | 0.177 | neutral | N | 0.449282502 | None | None | N |
P/T | 0.0761 | likely_benign | 0.0688 | benign | -0.815 | Destabilizing | 0.005 | N | 0.213 | neutral | N | 0.445548763 | None | None | N |
P/V | 0.1482 | likely_benign | 0.1362 | benign | -0.484 | Destabilizing | 0.185 | N | 0.348 | neutral | None | None | None | None | N |
P/W | 0.5695 | likely_pathogenic | 0.5135 | ambiguous | -0.851 | Destabilizing | 0.989 | D | 0.527 | neutral | None | None | None | None | N |
P/Y | 0.3154 | likely_benign | 0.2834 | benign | -0.569 | Destabilizing | 0.96 | D | 0.606 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.