Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25515 | 76768;76769;76770 | chr2:178569589;178569588;178569587 | chr2:179434316;179434315;179434314 |
N2AB | 23874 | 71845;71846;71847 | chr2:178569589;178569588;178569587 | chr2:179434316;179434315;179434314 |
N2A | 22947 | 69064;69065;69066 | chr2:178569589;178569588;178569587 | chr2:179434316;179434315;179434314 |
N2B | 16450 | 49573;49574;49575 | chr2:178569589;178569588;178569587 | chr2:179434316;179434315;179434314 |
Novex-1 | 16575 | 49948;49949;49950 | chr2:178569589;178569588;178569587 | chr2:179434316;179434315;179434314 |
Novex-2 | 16642 | 50149;50150;50151 | chr2:178569589;178569588;178569587 | chr2:179434316;179434315;179434314 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs755797898 | 0.602 | 0.684 | N | 0.477 | 0.251 | 0.331876078066 | gnomAD-2.1.1 | 8.12E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.13636E-04 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3927 | ambiguous | 0.4116 | ambiguous | -0.186 | Destabilizing | 0.007 | N | 0.26 | neutral | N | 0.454227827 | None | None | N |
E/C | 0.9575 | likely_pathogenic | 0.96 | pathogenic | -0.359 | Destabilizing | 0.987 | D | 0.432 | neutral | None | None | None | None | N |
E/D | 0.1137 | likely_benign | 0.1167 | benign | -0.316 | Destabilizing | 0.001 | N | 0.173 | neutral | N | 0.384847887 | None | None | N |
E/F | 0.9402 | likely_pathogenic | 0.944 | pathogenic | 0.059 | Stabilizing | 0.953 | D | 0.413 | neutral | None | None | None | None | N |
E/G | 0.4115 | ambiguous | 0.4231 | ambiguous | -0.363 | Destabilizing | 0.521 | D | 0.431 | neutral | D | 0.522164973 | None | None | N |
E/H | 0.7959 | likely_pathogenic | 0.8178 | pathogenic | 0.642 | Stabilizing | 0.984 | D | 0.446 | neutral | None | None | None | None | N |
E/I | 0.815 | likely_pathogenic | 0.8223 | pathogenic | 0.244 | Stabilizing | 0.91 | D | 0.418 | neutral | None | None | None | None | N |
E/K | 0.6943 | likely_pathogenic | 0.7067 | pathogenic | 0.331 | Stabilizing | 0.684 | D | 0.477 | neutral | N | 0.460132292 | None | None | N |
E/L | 0.7664 | likely_pathogenic | 0.7876 | pathogenic | 0.244 | Stabilizing | 0.59 | D | 0.406 | neutral | None | None | None | None | N |
E/M | 0.8367 | likely_pathogenic | 0.8451 | pathogenic | 0.009 | Stabilizing | 0.996 | D | 0.419 | neutral | None | None | None | None | N |
E/N | 0.4766 | ambiguous | 0.4853 | ambiguous | -0.168 | Destabilizing | 0.742 | D | 0.452 | neutral | None | None | None | None | N |
E/P | 0.8056 | likely_pathogenic | 0.852 | pathogenic | 0.12 | Stabilizing | 0.953 | D | 0.42 | neutral | None | None | None | None | N |
E/Q | 0.4003 | ambiguous | 0.4231 | ambiguous | -0.097 | Destabilizing | 0.815 | D | 0.457 | neutral | N | 0.521298181 | None | None | N |
E/R | 0.7751 | likely_pathogenic | 0.7861 | pathogenic | 0.688 | Stabilizing | 0.953 | D | 0.438 | neutral | None | None | None | None | N |
E/S | 0.3924 | ambiguous | 0.4089 | ambiguous | -0.294 | Destabilizing | 0.59 | D | 0.449 | neutral | None | None | None | None | N |
E/T | 0.5574 | ambiguous | 0.5686 | pathogenic | -0.13 | Destabilizing | 0.742 | D | 0.445 | neutral | None | None | None | None | N |
E/V | 0.6025 | likely_pathogenic | 0.6157 | pathogenic | 0.12 | Stabilizing | 0.521 | D | 0.409 | neutral | D | 0.522338331 | None | None | N |
E/W | 0.9803 | likely_pathogenic | 0.9818 | pathogenic | 0.209 | Stabilizing | 0.996 | D | 0.532 | neutral | None | None | None | None | N |
E/Y | 0.8675 | likely_pathogenic | 0.8827 | pathogenic | 0.303 | Stabilizing | 0.984 | D | 0.418 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.