Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25517 | 76774;76775;76776 | chr2:178569583;178569582;178569581 | chr2:179434310;179434309;179434308 |
N2AB | 23876 | 71851;71852;71853 | chr2:178569583;178569582;178569581 | chr2:179434310;179434309;179434308 |
N2A | 22949 | 69070;69071;69072 | chr2:178569583;178569582;178569581 | chr2:179434310;179434309;179434308 |
N2B | 16452 | 49579;49580;49581 | chr2:178569583;178569582;178569581 | chr2:179434310;179434309;179434308 |
Novex-1 | 16577 | 49954;49955;49956 | chr2:178569583;178569582;178569581 | chr2:179434310;179434309;179434308 |
Novex-2 | 16644 | 50155;50156;50157 | chr2:178569583;178569582;178569581 | chr2:179434310;179434309;179434308 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs780584058 | None | 0.969 | N | 0.529 | 0.357 | 0.5452609689 | gnomAD-4.0.0 | 2.05375E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.48092E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9423 | likely_pathogenic | 0.9431 | pathogenic | 0.144 | Stabilizing | 0.953 | D | 0.57 | neutral | None | None | None | None | I |
R/C | 0.5896 | likely_pathogenic | 0.6071 | pathogenic | -0.152 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | I |
R/D | 0.984 | likely_pathogenic | 0.9843 | pathogenic | -0.188 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | I |
R/E | 0.8999 | likely_pathogenic | 0.8992 | pathogenic | -0.127 | Destabilizing | 0.976 | D | 0.596 | neutral | None | None | None | None | I |
R/F | 0.9699 | likely_pathogenic | 0.971 | pathogenic | -0.134 | Destabilizing | 0.986 | D | 0.668 | neutral | None | None | None | None | I |
R/G | 0.8034 | likely_pathogenic | 0.8085 | pathogenic | -0.026 | Destabilizing | 0.969 | D | 0.529 | neutral | N | 0.514257566 | None | None | I |
R/H | 0.4183 | ambiguous | 0.433 | ambiguous | -0.579 | Destabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | I |
R/I | 0.9237 | likely_pathogenic | 0.9238 | pathogenic | 0.549 | Stabilizing | 0.973 | D | 0.655 | neutral | None | None | None | None | I |
R/K | 0.2781 | likely_benign | 0.2803 | benign | -0.003 | Destabilizing | 0.863 | D | 0.596 | neutral | N | 0.484913307 | None | None | I |
R/L | 0.8153 | likely_pathogenic | 0.8339 | pathogenic | 0.549 | Stabilizing | 0.778 | D | 0.553 | neutral | None | None | None | None | I |
R/M | 0.869 | likely_pathogenic | 0.8694 | pathogenic | 0.009 | Stabilizing | 0.76 | D | 0.455 | neutral | N | 0.488335675 | None | None | I |
R/N | 0.9649 | likely_pathogenic | 0.9628 | pathogenic | 0.065 | Stabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | I |
R/P | 0.9698 | likely_pathogenic | 0.9777 | pathogenic | 0.433 | Stabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | I |
R/Q | 0.3067 | likely_benign | 0.2967 | benign | 0.045 | Stabilizing | 0.993 | D | 0.599 | neutral | None | None | None | None | I |
R/S | 0.9586 | likely_pathogenic | 0.957 | pathogenic | -0.135 | Destabilizing | 0.969 | D | 0.558 | neutral | N | 0.489421631 | None | None | I |
R/T | 0.91 | likely_pathogenic | 0.9057 | pathogenic | 0.048 | Stabilizing | 0.939 | D | 0.559 | neutral | N | 0.494194571 | None | None | I |
R/V | 0.9335 | likely_pathogenic | 0.9346 | pathogenic | 0.433 | Stabilizing | 0.91 | D | 0.568 | neutral | None | None | None | None | I |
R/W | 0.6403 | likely_pathogenic | 0.6532 | pathogenic | -0.305 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | N | 0.5153407 | None | None | I |
R/Y | 0.8927 | likely_pathogenic | 0.8957 | pathogenic | 0.123 | Stabilizing | 0.993 | D | 0.639 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.