Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25518 | 76777;76778;76779 | chr2:178569580;178569579;178569578 | chr2:179434307;179434306;179434305 |
N2AB | 23877 | 71854;71855;71856 | chr2:178569580;178569579;178569578 | chr2:179434307;179434306;179434305 |
N2A | 22950 | 69073;69074;69075 | chr2:178569580;178569579;178569578 | chr2:179434307;179434306;179434305 |
N2B | 16453 | 49582;49583;49584 | chr2:178569580;178569579;178569578 | chr2:179434307;179434306;179434305 |
Novex-1 | 16578 | 49957;49958;49959 | chr2:178569580;178569579;178569578 | chr2:179434307;179434306;179434305 |
Novex-2 | 16645 | 50158;50159;50160 | chr2:178569580;178569579;178569578 | chr2:179434307;179434306;179434305 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.892 | N | 0.618 | 0.295 | 0.275641507738 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9154 | likely_pathogenic | 0.9204 | pathogenic | -0.037 | Destabilizing | 0.845 | D | 0.585 | neutral | None | None | None | None | I |
K/C | 0.9621 | likely_pathogenic | 0.9626 | pathogenic | -0.3 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | I |
K/D | 0.9011 | likely_pathogenic | 0.9082 | pathogenic | 0.142 | Stabilizing | 0.975 | D | 0.605 | neutral | None | None | None | None | I |
K/E | 0.7146 | likely_pathogenic | 0.7416 | pathogenic | 0.183 | Stabilizing | 0.892 | D | 0.638 | neutral | N | 0.484359202 | None | None | I |
K/F | 0.9933 | likely_pathogenic | 0.9935 | pathogenic | -0.1 | Destabilizing | 0.987 | D | 0.661 | neutral | None | None | None | None | I |
K/G | 0.8568 | likely_pathogenic | 0.8612 | pathogenic | -0.275 | Destabilizing | 0.975 | D | 0.528 | neutral | None | None | None | None | I |
K/H | 0.6703 | likely_pathogenic | 0.685 | pathogenic | -0.471 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
K/I | 0.9688 | likely_pathogenic | 0.9698 | pathogenic | 0.522 | Stabilizing | 0.967 | D | 0.651 | neutral | N | 0.506048309 | None | None | I |
K/L | 0.9216 | likely_pathogenic | 0.9262 | pathogenic | 0.522 | Stabilizing | 0.845 | D | 0.532 | neutral | None | None | None | None | I |
K/M | 0.8672 | likely_pathogenic | 0.8722 | pathogenic | 0.137 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
K/N | 0.8134 | likely_pathogenic | 0.8212 | pathogenic | 0.066 | Stabilizing | 0.967 | D | 0.641 | neutral | N | 0.485880139 | None | None | I |
K/P | 0.9705 | likely_pathogenic | 0.9751 | pathogenic | 0.365 | Stabilizing | 0.987 | D | 0.638 | neutral | None | None | None | None | I |
K/Q | 0.4048 | ambiguous | 0.4169 | ambiguous | -0.016 | Destabilizing | 0.983 | D | 0.665 | neutral | D | 0.522530332 | None | None | I |
K/R | 0.1106 | likely_benign | 0.1122 | benign | -0.126 | Destabilizing | 0.892 | D | 0.618 | neutral | N | 0.510158468 | None | None | I |
K/S | 0.8857 | likely_pathogenic | 0.8929 | pathogenic | -0.424 | Destabilizing | 0.845 | D | 0.625 | neutral | None | None | None | None | I |
K/T | 0.7681 | likely_pathogenic | 0.7857 | pathogenic | -0.219 | Destabilizing | 0.025 | N | 0.379 | neutral | N | 0.500768391 | None | None | I |
K/V | 0.9434 | likely_pathogenic | 0.9457 | pathogenic | 0.365 | Stabilizing | 0.95 | D | 0.523 | neutral | None | None | None | None | I |
K/W | 0.9799 | likely_pathogenic | 0.9819 | pathogenic | -0.128 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
K/Y | 0.9579 | likely_pathogenic | 0.9613 | pathogenic | 0.209 | Stabilizing | 0.996 | D | 0.619 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.