Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25520 | 76783;76784;76785 | chr2:178569574;178569573;178569572 | chr2:179434301;179434300;179434299 |
N2AB | 23879 | 71860;71861;71862 | chr2:178569574;178569573;178569572 | chr2:179434301;179434300;179434299 |
N2A | 22952 | 69079;69080;69081 | chr2:178569574;178569573;178569572 | chr2:179434301;179434300;179434299 |
N2B | 16455 | 49588;49589;49590 | chr2:178569574;178569573;178569572 | chr2:179434301;179434300;179434299 |
Novex-1 | 16580 | 49963;49964;49965 | chr2:178569574;178569573;178569572 | chr2:179434301;179434300;179434299 |
Novex-2 | 16647 | 50164;50165;50166 | chr2:178569574;178569573;178569572 | chr2:179434301;179434300;179434299 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1553601714 | None | 0.22 | N | 0.641 | 0.365 | 0.665058716224 | gnomAD-4.0.0 | 1.36904E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.53024E-05 | None | 0 | 0 | 8.99666E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6168 | likely_pathogenic | 0.6329 | pathogenic | -2.035 | Highly Destabilizing | 0.072 | N | 0.618 | neutral | None | None | None | None | I |
I/C | 0.6945 | likely_pathogenic | 0.715 | pathogenic | -1.43 | Destabilizing | 0.968 | D | 0.651 | neutral | None | None | None | None | I |
I/D | 0.9491 | likely_pathogenic | 0.9576 | pathogenic | -1.456 | Destabilizing | 0.89 | D | 0.767 | deleterious | None | None | None | None | I |
I/E | 0.8675 | likely_pathogenic | 0.8896 | pathogenic | -1.355 | Destabilizing | 0.726 | D | 0.754 | deleterious | None | None | None | None | I |
I/F | 0.2665 | likely_benign | 0.2701 | benign | -1.254 | Destabilizing | 0.396 | N | 0.591 | neutral | None | None | None | None | I |
I/G | 0.8874 | likely_pathogenic | 0.8945 | pathogenic | -2.469 | Highly Destabilizing | 0.726 | D | 0.731 | prob.delet. | None | None | None | None | I |
I/H | 0.7034 | likely_pathogenic | 0.722 | pathogenic | -1.651 | Destabilizing | 0.968 | D | 0.747 | deleterious | None | None | None | None | I |
I/K | 0.662 | likely_pathogenic | 0.7097 | pathogenic | -1.522 | Destabilizing | 0.667 | D | 0.747 | deleterious | N | 0.493583276 | None | None | I |
I/L | 0.1112 | likely_benign | 0.1164 | benign | -0.862 | Destabilizing | None | N | 0.218 | neutral | N | 0.462562096 | None | None | I |
I/M | 0.1176 | likely_benign | 0.1254 | benign | -0.758 | Destabilizing | 0.331 | N | 0.6 | neutral | D | 0.527403008 | None | None | I |
I/N | 0.5854 | likely_pathogenic | 0.6086 | pathogenic | -1.531 | Destabilizing | 0.89 | D | 0.771 | deleterious | None | None | None | None | I |
I/P | 0.9549 | likely_pathogenic | 0.9587 | pathogenic | -1.224 | Destabilizing | 0.89 | D | 0.765 | deleterious | None | None | None | None | I |
I/Q | 0.6506 | likely_pathogenic | 0.6847 | pathogenic | -1.557 | Destabilizing | 0.89 | D | 0.762 | deleterious | None | None | None | None | I |
I/R | 0.5989 | likely_pathogenic | 0.6401 | pathogenic | -1.04 | Destabilizing | 0.667 | D | 0.77 | deleterious | N | 0.516802866 | None | None | I |
I/S | 0.6216 | likely_pathogenic | 0.6353 | pathogenic | -2.26 | Highly Destabilizing | 0.726 | D | 0.689 | prob.neutral | None | None | None | None | I |
I/T | 0.43 | ambiguous | 0.4417 | ambiguous | -2.016 | Highly Destabilizing | 0.22 | N | 0.641 | neutral | N | 0.486074858 | None | None | I |
I/V | 0.0758 | likely_benign | 0.0766 | benign | -1.224 | Destabilizing | None | N | 0.198 | neutral | N | 0.401529493 | None | None | I |
I/W | 0.8513 | likely_pathogenic | 0.8647 | pathogenic | -1.403 | Destabilizing | 0.968 | D | 0.733 | prob.delet. | None | None | None | None | I |
I/Y | 0.6652 | likely_pathogenic | 0.6852 | pathogenic | -1.166 | Destabilizing | 0.726 | D | 0.699 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.