Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25524 | 76795;76796;76797 | chr2:178569562;178569561;178569560 | chr2:179434289;179434288;179434287 |
N2AB | 23883 | 71872;71873;71874 | chr2:178569562;178569561;178569560 | chr2:179434289;179434288;179434287 |
N2A | 22956 | 69091;69092;69093 | chr2:178569562;178569561;178569560 | chr2:179434289;179434288;179434287 |
N2B | 16459 | 49600;49601;49602 | chr2:178569562;178569561;178569560 | chr2:179434289;179434288;179434287 |
Novex-1 | 16584 | 49975;49976;49977 | chr2:178569562;178569561;178569560 | chr2:179434289;179434288;179434287 |
Novex-2 | 16651 | 50176;50177;50178 | chr2:178569562;178569561;178569560 | chr2:179434289;179434288;179434287 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs766397845 | -0.622 | 0.996 | N | 0.636 | 0.217 | 0.148003135375 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6828 | likely_pathogenic | 0.6935 | pathogenic | -0.851 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
A/D | 0.9065 | likely_pathogenic | 0.9223 | pathogenic | -0.733 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | I |
A/E | 0.8444 | likely_pathogenic | 0.8692 | pathogenic | -0.874 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.487469956 | None | None | I |
A/F | 0.8262 | likely_pathogenic | 0.8375 | pathogenic | -1.043 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
A/G | 0.3814 | ambiguous | 0.3899 | ambiguous | -0.659 | Destabilizing | 0.996 | D | 0.517 | neutral | N | 0.512361964 | None | None | I |
A/H | 0.8503 | likely_pathogenic | 0.8654 | pathogenic | -0.667 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
A/I | 0.7883 | likely_pathogenic | 0.8032 | pathogenic | -0.501 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
A/K | 0.9278 | likely_pathogenic | 0.9484 | pathogenic | -0.925 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
A/L | 0.7194 | likely_pathogenic | 0.7323 | pathogenic | -0.501 | Destabilizing | 0.998 | D | 0.675 | neutral | None | None | None | None | I |
A/M | 0.7175 | likely_pathogenic | 0.7211 | pathogenic | -0.441 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
A/N | 0.7428 | likely_pathogenic | 0.746 | pathogenic | -0.572 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | I |
A/P | 0.931 | likely_pathogenic | 0.9438 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.471594323 | None | None | I |
A/Q | 0.7822 | likely_pathogenic | 0.7975 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
A/R | 0.8623 | likely_pathogenic | 0.8928 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
A/S | 0.1502 | likely_benign | 0.1446 | benign | -0.801 | Destabilizing | 0.957 | D | 0.416 | neutral | N | 0.513717982 | None | None | I |
A/T | 0.4483 | ambiguous | 0.4487 | ambiguous | -0.865 | Destabilizing | 0.996 | D | 0.636 | neutral | N | 0.510851035 | None | None | I |
A/V | 0.4489 | ambiguous | 0.4764 | ambiguous | -0.486 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | N | 0.510925606 | None | None | I |
A/W | 0.9672 | likely_pathogenic | 0.9735 | pathogenic | -1.181 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
A/Y | 0.8749 | likely_pathogenic | 0.8859 | pathogenic | -0.851 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.