Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25529 | 76810;76811;76812 | chr2:178569547;178569546;178569545 | chr2:179434274;179434273;179434272 |
N2AB | 23888 | 71887;71888;71889 | chr2:178569547;178569546;178569545 | chr2:179434274;179434273;179434272 |
N2A | 22961 | 69106;69107;69108 | chr2:178569547;178569546;178569545 | chr2:179434274;179434273;179434272 |
N2B | 16464 | 49615;49616;49617 | chr2:178569547;178569546;178569545 | chr2:179434274;179434273;179434272 |
Novex-1 | 16589 | 49990;49991;49992 | chr2:178569547;178569546;178569545 | chr2:179434274;179434273;179434272 |
Novex-2 | 16656 | 50191;50192;50193 | chr2:178569547;178569546;178569545 | chr2:179434274;179434273;179434272 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs750282861 | 0.1 | 0.014 | N | 0.312 | 0.173 | 0.104622674875 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | I | None | 0 | 1.74571E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/K | rs750282861 | 0.1 | 0.014 | N | 0.312 | 0.173 | 0.104622674875 | gnomAD-4.0.0 | 4.10715E-06 | None | None | None | None | I | None | 0 | 1.34391E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9496 | likely_pathogenic | 0.9639 | pathogenic | -0.276 | Destabilizing | 0.86 | D | 0.625 | neutral | None | None | None | None | I |
R/C | 0.4738 | ambiguous | 0.5159 | ambiguous | -0.473 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | I |
R/D | 0.9821 | likely_pathogenic | 0.9854 | pathogenic | -0.008 | Destabilizing | 0.956 | D | 0.603 | neutral | None | None | None | None | I |
R/E | 0.8966 | likely_pathogenic | 0.9175 | pathogenic | 0.058 | Stabilizing | 0.754 | D | 0.643 | neutral | None | None | None | None | I |
R/F | 0.9257 | likely_pathogenic | 0.9363 | pathogenic | -0.507 | Destabilizing | 0.993 | D | 0.671 | neutral | None | None | None | None | I |
R/G | 0.9135 | likely_pathogenic | 0.9339 | pathogenic | -0.471 | Destabilizing | 0.822 | D | 0.599 | neutral | N | 0.476607526 | None | None | I |
R/H | 0.2226 | likely_benign | 0.2581 | benign | -0.818 | Destabilizing | 0.978 | D | 0.657 | neutral | None | None | None | None | I |
R/I | 0.8055 | likely_pathogenic | 0.8343 | pathogenic | 0.204 | Stabilizing | 0.978 | D | 0.679 | prob.neutral | None | None | None | None | I |
R/K | 0.34 | ambiguous | 0.3866 | ambiguous | -0.298 | Destabilizing | 0.014 | N | 0.312 | neutral | N | 0.498073739 | None | None | I |
R/L | 0.7605 | likely_pathogenic | 0.7957 | pathogenic | 0.204 | Stabilizing | 0.86 | D | 0.599 | neutral | None | None | None | None | I |
R/M | 0.8364 | likely_pathogenic | 0.865 | pathogenic | -0.158 | Destabilizing | 0.992 | D | 0.661 | neutral | N | 0.479481135 | None | None | I |
R/N | 0.9497 | likely_pathogenic | 0.9597 | pathogenic | -0.058 | Destabilizing | 0.86 | D | 0.611 | neutral | None | None | None | None | I |
R/P | 0.9906 | likely_pathogenic | 0.9924 | pathogenic | 0.064 | Stabilizing | 0.978 | D | 0.679 | prob.neutral | None | None | None | None | I |
R/Q | 0.3009 | likely_benign | 0.3503 | ambiguous | -0.201 | Destabilizing | 0.16 | N | 0.367 | neutral | None | None | None | None | I |
R/S | 0.9348 | likely_pathogenic | 0.9506 | pathogenic | -0.559 | Destabilizing | 0.822 | D | 0.615 | neutral | N | 0.509637527 | None | None | I |
R/T | 0.8339 | likely_pathogenic | 0.8766 | pathogenic | -0.353 | Destabilizing | 0.822 | D | 0.599 | neutral | N | 0.495473364 | None | None | I |
R/V | 0.8435 | likely_pathogenic | 0.8731 | pathogenic | 0.064 | Stabilizing | 0.956 | D | 0.646 | neutral | None | None | None | None | I |
R/W | 0.5338 | ambiguous | 0.5477 | ambiguous | -0.473 | Destabilizing | 0.997 | D | 0.663 | neutral | N | 0.50648616 | None | None | I |
R/Y | 0.7825 | likely_pathogenic | 0.803 | pathogenic | -0.081 | Destabilizing | 0.993 | D | 0.677 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.