Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2553 | 7882;7883;7884 | chr2:178773307;178773306;178773305 | chr2:179638034;179638033;179638032 |
N2AB | 2553 | 7882;7883;7884 | chr2:178773307;178773306;178773305 | chr2:179638034;179638033;179638032 |
N2A | 2553 | 7882;7883;7884 | chr2:178773307;178773306;178773305 | chr2:179638034;179638033;179638032 |
N2B | 2507 | 7744;7745;7746 | chr2:178773307;178773306;178773305 | chr2:179638034;179638033;179638032 |
Novex-1 | 2507 | 7744;7745;7746 | chr2:178773307;178773306;178773305 | chr2:179638034;179638033;179638032 |
Novex-2 | 2507 | 7744;7745;7746 | chr2:178773307;178773306;178773305 | chr2:179638034;179638033;179638032 |
Novex-3 | 2553 | 7882;7883;7884 | chr2:178773307;178773306;178773305 | chr2:179638034;179638033;179638032 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs367621583 | 0.33 | 0.549 | D | 0.499 | 0.385 | None | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.93E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | rs367621583 | 0.33 | 0.549 | D | 0.499 | 0.385 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 2.88184E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/A | rs367621583 | 0.33 | 0.549 | D | 0.499 | 0.385 | None | gnomAD-4.0.0 | 2.5618E-06 | None | None | None | None | N | None | 0 | 0 | None | 8.17996E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3812 | ambiguous | 0.341 | ambiguous | -0.737 | Destabilizing | 0.549 | D | 0.499 | neutral | D | 0.624557274 | None | None | N |
E/C | 0.9479 | likely_pathogenic | 0.9437 | pathogenic | -0.497 | Destabilizing | 0.992 | D | 0.642 | neutral | None | None | None | None | N |
E/D | 0.3662 | ambiguous | 0.3374 | benign | -1.186 | Destabilizing | 0.004 | N | 0.328 | neutral | D | 0.575003209 | None | None | N |
E/F | 0.9494 | likely_pathogenic | 0.9337 | pathogenic | 0.04 | Stabilizing | 0.972 | D | 0.629 | neutral | None | None | None | None | N |
E/G | 0.5679 | likely_pathogenic | 0.503 | ambiguous | -1.145 | Destabilizing | 0.549 | D | 0.519 | neutral | D | 0.627992015 | None | None | N |
E/H | 0.773 | likely_pathogenic | 0.7346 | pathogenic | -0.224 | Destabilizing | 0.92 | D | 0.531 | neutral | None | None | None | None | N |
E/I | 0.685 | likely_pathogenic | 0.6459 | pathogenic | 0.391 | Stabilizing | 0.85 | D | 0.615 | neutral | None | None | None | None | N |
E/K | 0.4395 | ambiguous | 0.3588 | ambiguous | -0.674 | Destabilizing | 0.379 | N | 0.552 | neutral | D | 0.564832684 | None | None | N |
E/L | 0.7835 | likely_pathogenic | 0.7483 | pathogenic | 0.391 | Stabilizing | 0.617 | D | 0.582 | neutral | None | None | None | None | N |
E/M | 0.7632 | likely_pathogenic | 0.7269 | pathogenic | 0.775 | Stabilizing | 0.992 | D | 0.613 | neutral | None | None | None | None | N |
E/N | 0.5762 | likely_pathogenic | 0.5388 | ambiguous | -1.25 | Destabilizing | 0.021 | N | 0.454 | neutral | None | None | None | None | N |
E/P | 0.9701 | likely_pathogenic | 0.968 | pathogenic | 0.037 | Stabilizing | 0.92 | D | 0.573 | neutral | None | None | None | None | N |
E/Q | 0.2919 | likely_benign | 0.2637 | benign | -1.068 | Destabilizing | 0.549 | D | 0.53 | neutral | D | 0.583563682 | None | None | N |
E/R | 0.6375 | likely_pathogenic | 0.5727 | pathogenic | -0.351 | Destabilizing | 0.012 | N | 0.421 | neutral | None | None | None | None | N |
E/S | 0.4092 | ambiguous | 0.3816 | ambiguous | -1.597 | Destabilizing | 0.447 | N | 0.517 | neutral | None | None | None | None | N |
E/T | 0.4019 | ambiguous | 0.3643 | ambiguous | -1.25 | Destabilizing | 0.021 | N | 0.415 | neutral | None | None | None | None | N |
E/V | 0.4638 | ambiguous | 0.4163 | ambiguous | 0.037 | Stabilizing | 0.81 | D | 0.583 | neutral | D | 0.599020109 | None | None | N |
E/W | 0.9813 | likely_pathogenic | 0.9738 | pathogenic | 0.296 | Stabilizing | 0.992 | D | 0.649 | neutral | None | None | None | None | N |
E/Y | 0.912 | likely_pathogenic | 0.8864 | pathogenic | 0.302 | Stabilizing | 0.972 | D | 0.61 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.