Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25533 | 76822;76823;76824 | chr2:178569535;178569534;178569533 | chr2:179434262;179434261;179434260 |
N2AB | 23892 | 71899;71900;71901 | chr2:178569535;178569534;178569533 | chr2:179434262;179434261;179434260 |
N2A | 22965 | 69118;69119;69120 | chr2:178569535;178569534;178569533 | chr2:179434262;179434261;179434260 |
N2B | 16468 | 49627;49628;49629 | chr2:178569535;178569534;178569533 | chr2:179434262;179434261;179434260 |
Novex-1 | 16593 | 50002;50003;50004 | chr2:178569535;178569534;178569533 | chr2:179434262;179434261;179434260 |
Novex-2 | 16660 | 50203;50204;50205 | chr2:178569535;178569534;178569533 | chr2:179434262;179434261;179434260 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1707347772 | None | 1.0 | D | 0.78 | 0.426 | 0.448300063881 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1709 | likely_benign | 0.2141 | benign | -0.97 | Destabilizing | 1.0 | D | 0.74 | deleterious | D | 0.525976069 | None | None | I |
P/C | 0.7798 | likely_pathogenic | 0.8341 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
P/D | 0.8759 | likely_pathogenic | 0.8954 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
P/E | 0.7461 | likely_pathogenic | 0.7826 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
P/F | 0.8547 | likely_pathogenic | 0.8983 | pathogenic | -0.659 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
P/G | 0.601 | likely_pathogenic | 0.6363 | pathogenic | -1.258 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
P/H | 0.5435 | ambiguous | 0.5996 | pathogenic | -0.59 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.496706694 | None | None | I |
P/I | 0.6545 | likely_pathogenic | 0.7428 | pathogenic | -0.285 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/K | 0.717 | likely_pathogenic | 0.7411 | pathogenic | -0.79 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
P/L | 0.2877 | likely_benign | 0.3458 | ambiguous | -0.285 | Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.487743472 | None | None | I |
P/M | 0.5922 | likely_pathogenic | 0.6569 | pathogenic | -0.426 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
P/N | 0.6683 | likely_pathogenic | 0.71 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
P/Q | 0.4634 | ambiguous | 0.5205 | ambiguous | -0.874 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
P/R | 0.5566 | ambiguous | 0.5964 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.523917199 | None | None | I |
P/S | 0.3013 | likely_benign | 0.3639 | ambiguous | -1.275 | Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.530112453 | None | None | I |
P/T | 0.2082 | likely_benign | 0.2565 | benign | -1.132 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.477470046 | None | None | I |
P/V | 0.4653 | ambiguous | 0.5597 | ambiguous | -0.479 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
P/W | 0.9321 | likely_pathogenic | 0.9502 | pathogenic | -0.858 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
P/Y | 0.8202 | likely_pathogenic | 0.8697 | pathogenic | -0.52 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.