Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2553776834;76835;76836 chr2:178569523;178569522;178569521chr2:179434250;179434249;179434248
N2AB2389671911;71912;71913 chr2:178569523;178569522;178569521chr2:179434250;179434249;179434248
N2A2296969130;69131;69132 chr2:178569523;178569522;178569521chr2:179434250;179434249;179434248
N2B1647249639;49640;49641 chr2:178569523;178569522;178569521chr2:179434250;179434249;179434248
Novex-11659750014;50015;50016 chr2:178569523;178569522;178569521chr2:179434250;179434249;179434248
Novex-21666450215;50216;50217 chr2:178569523;178569522;178569521chr2:179434250;179434249;179434248
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGT
  • RefSeq wild type template codon: GCA
  • Domain: Ig-135
  • Domain position: 24
  • Structural Position: 41
  • Q(SASA): 0.7785
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs527631472 -0.196 1.0 N 0.67 0.474 0.608244025668 gnomAD-2.1.1 8.07E-06 None None None None I None 0 0 None 0 5.61E-05 None 0 None 0 8.91E-06 0
R/C rs527631472 -0.196 1.0 N 0.67 0.474 0.608244025668 gnomAD-3.1.2 1.32E-05 None None None None I None 0 0 0 0 0 None 0 0 2.94E-05 0 0
R/C rs527631472 -0.196 1.0 N 0.67 0.474 0.608244025668 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 0 1E-03 None None None 0 None
R/C rs527631472 -0.196 1.0 N 0.67 0.474 0.608244025668 gnomAD-4.0.0 3.10092E-06 None None None None I None 0 0 None 0 2.23594E-05 None 0 0 2.54424E-06 1.09965E-05 0
R/G rs527631472 -0.288 0.998 D 0.583 0.468 0.613844073566 gnomAD-2.1.1 4.04E-06 None None None None I None 0 0 None 0 0 None 3.28E-05 None 0 0 0
R/G rs527631472 -0.288 0.998 D 0.583 0.468 0.613844073566 gnomAD-4.0.0 2.05425E-06 None None None None I None 0 0 None 0 0 None 0 0 0 3.48303E-05 0
R/H rs561977468 -0.542 0.783 D 0.425 0.318 None gnomAD-2.1.1 1.397E-04 None None None None I None 1.65412E-04 0 None 0 1.60074E-03 None 0 None 0 2.35E-05 1.41283E-04
R/H rs561977468 -0.542 0.783 D 0.425 0.318 None gnomAD-3.1.2 8.55E-05 None None None None I None 1.20703E-04 0 0 0 9.67867E-04 None 0 0 4.41E-05 0 0
R/H rs561977468 -0.542 0.783 D 0.425 0.318 None 1000 genomes 1.99681E-04 None None None None I None 8E-04 0 None None 0 0 None None None 0 None
R/H rs561977468 -0.542 0.783 D 0.425 0.318 None gnomAD-4.0.0 4.65074E-05 None None None None I None 1.20131E-04 1.66939E-05 None 0 6.25978E-04 None 0 1.65344E-04 2.28965E-05 4.39754E-05 8.01E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.9567 likely_pathogenic 0.9606 pathogenic 0.071 Stabilizing 0.996 D 0.635 neutral None None None None I
R/C 0.4251 ambiguous 0.4322 ambiguous -0.092 Destabilizing 1.0 D 0.67 neutral N 0.506127669 None None I
R/D 0.9875 likely_pathogenic 0.9887 pathogenic -0.213 Destabilizing 0.999 D 0.581 neutral None None None None I
R/E 0.9135 likely_pathogenic 0.9238 pathogenic -0.162 Destabilizing 0.992 D 0.603 neutral None None None None I
R/F 0.8532 likely_pathogenic 0.863 pathogenic -0.179 Destabilizing 0.999 D 0.629 neutral None None None None I
R/G 0.9404 likely_pathogenic 0.9455 pathogenic -0.099 Destabilizing 0.998 D 0.583 neutral D 0.528586791 None None I
R/H 0.2308 likely_benign 0.235 benign -0.61 Destabilizing 0.783 D 0.425 neutral D 0.531211318 None None I
R/I 0.6546 likely_pathogenic 0.6929 pathogenic 0.479 Stabilizing 1.0 D 0.628 neutral None None None None I
R/K 0.2173 likely_benign 0.2244 benign -0.047 Destabilizing 0.99 D 0.539 neutral None None None None I
R/L 0.7306 likely_pathogenic 0.7423 pathogenic 0.479 Stabilizing 0.999 D 0.568 neutral D 0.530864601 None None I
R/M 0.7804 likely_pathogenic 0.7892 pathogenic 0.04 Stabilizing 1.0 D 0.59 neutral None None None None I
R/N 0.9363 likely_pathogenic 0.9448 pathogenic 0.14 Stabilizing 0.992 D 0.592 neutral None None None None I
R/P 0.997 likely_pathogenic 0.997 pathogenic 0.362 Stabilizing 1.0 D 0.611 neutral D 0.52884028 None None I
R/Q 0.3055 likely_benign 0.3174 benign 0.065 Stabilizing 0.999 D 0.582 neutral None None None None I
R/S 0.9491 likely_pathogenic 0.954 pathogenic -0.099 Destabilizing 0.998 D 0.613 neutral D 0.522647762 None None I
R/T 0.8833 likely_pathogenic 0.9012 pathogenic 0.071 Stabilizing 1.0 D 0.575 neutral None None None None I
R/V 0.7936 likely_pathogenic 0.8167 pathogenic 0.362 Stabilizing 1.0 D 0.618 neutral None None None None I
R/W 0.4497 ambiguous 0.4626 ambiguous -0.305 Destabilizing 1.0 D 0.682 prob.neutral None None None None I
R/Y 0.655 likely_pathogenic 0.6803 pathogenic 0.102 Stabilizing 0.998 D 0.605 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.