Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25539 | 76840;76841;76842 | chr2:178569517;178569516;178569515 | chr2:179434244;179434243;179434242 |
N2AB | 23898 | 71917;71918;71919 | chr2:178569517;178569516;178569515 | chr2:179434244;179434243;179434242 |
N2A | 22971 | 69136;69137;69138 | chr2:178569517;178569516;178569515 | chr2:179434244;179434243;179434242 |
N2B | 16474 | 49645;49646;49647 | chr2:178569517;178569516;178569515 | chr2:179434244;179434243;179434242 |
Novex-1 | 16599 | 50020;50021;50022 | chr2:178569517;178569516;178569515 | chr2:179434244;179434243;179434242 |
Novex-2 | 16666 | 50221;50222;50223 | chr2:178569517;178569516;178569515 | chr2:179434244;179434243;179434242 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs746337217 | 0.068 | 0.627 | N | 0.375 | 0.437 | 0.401185642668 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/I | rs746337217 | 0.068 | 0.627 | N | 0.375 | 0.437 | 0.401185642668 | gnomAD-4.0.0 | 2.73857E-06 | None | None | None | None | I | None | 0 | 2.23994E-05 | None | 0 | 0 | None | 0 | 0 | 1.79969E-06 | 0 | 1.65788E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.057 | likely_benign | 0.0572 | benign | -0.584 | Destabilizing | None | N | 0.145 | neutral | N | 0.473664524 | None | None | I |
T/C | 0.3131 | likely_benign | 0.3407 | ambiguous | -0.367 | Destabilizing | 0.944 | D | 0.381 | neutral | None | None | None | None | I |
T/D | 0.32 | likely_benign | 0.3534 | ambiguous | 0.101 | Stabilizing | 0.563 | D | 0.389 | neutral | None | None | None | None | I |
T/E | 0.2357 | likely_benign | 0.2584 | benign | 0.043 | Stabilizing | 0.388 | N | 0.347 | neutral | None | None | None | None | I |
T/F | 0.1594 | likely_benign | 0.1794 | benign | -0.901 | Destabilizing | 0.818 | D | 0.466 | neutral | None | None | None | None | I |
T/G | 0.2561 | likely_benign | 0.2813 | benign | -0.757 | Destabilizing | 0.116 | N | 0.395 | neutral | None | None | None | None | I |
T/H | 0.243 | likely_benign | 0.2593 | benign | -1.098 | Destabilizing | 0.981 | D | 0.46 | neutral | None | None | None | None | I |
T/I | 0.0753 | likely_benign | 0.0846 | benign | -0.235 | Destabilizing | 0.627 | D | 0.375 | neutral | N | 0.521919831 | None | None | I |
T/K | 0.1859 | likely_benign | 0.2065 | benign | -0.585 | Destabilizing | 0.324 | N | 0.359 | neutral | N | 0.496944028 | None | None | I |
T/L | 0.0632 | likely_benign | 0.0678 | benign | -0.235 | Destabilizing | 0.241 | N | 0.326 | neutral | None | None | None | None | I |
T/M | 0.0709 | likely_benign | 0.0715 | benign | 0.018 | Stabilizing | 0.818 | D | 0.383 | neutral | None | None | None | None | I |
T/N | 0.116 | likely_benign | 0.1234 | benign | -0.339 | Destabilizing | 0.818 | D | 0.323 | neutral | None | None | None | None | I |
T/P | 0.0824 | likely_benign | 0.0804 | benign | -0.322 | Destabilizing | 0.001 | N | 0.205 | neutral | N | 0.49781082 | None | None | I |
T/Q | 0.1903 | likely_benign | 0.2008 | benign | -0.579 | Destabilizing | 0.818 | D | 0.389 | neutral | None | None | None | None | I |
T/R | 0.1793 | likely_benign | 0.196 | benign | -0.329 | Destabilizing | 0.627 | D | 0.377 | neutral | N | 0.513414991 | None | None | I |
T/S | 0.1015 | likely_benign | 0.1058 | benign | -0.597 | Destabilizing | 0.09 | N | 0.294 | neutral | N | 0.500773767 | None | None | I |
T/V | 0.0643 | likely_benign | 0.0699 | benign | -0.322 | Destabilizing | 0.116 | N | 0.25 | neutral | None | None | None | None | I |
T/W | 0.5733 | likely_pathogenic | 0.6046 | pathogenic | -0.842 | Destabilizing | 0.981 | D | 0.527 | neutral | None | None | None | None | I |
T/Y | 0.2332 | likely_benign | 0.2588 | benign | -0.604 | Destabilizing | 0.932 | D | 0.469 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.