Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 25546 | 76861;76862;76863 | chr2:178569496;178569495;178569494 | chr2:179434223;179434222;179434221 |
N2AB | 23905 | 71938;71939;71940 | chr2:178569496;178569495;178569494 | chr2:179434223;179434222;179434221 |
N2A | 22978 | 69157;69158;69159 | chr2:178569496;178569495;178569494 | chr2:179434223;179434222;179434221 |
N2B | 16481 | 49666;49667;49668 | chr2:178569496;178569495;178569494 | chr2:179434223;179434222;179434221 |
Novex-1 | 16606 | 50041;50042;50043 | chr2:178569496;178569495;178569494 | chr2:179434223;179434222;179434221 |
Novex-2 | 16673 | 50242;50243;50244 | chr2:178569496;178569495;178569494 | chr2:179434223;179434222;179434221 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | N | 0.751 | 0.304 | 0.183819452728 | gnomAD-4.0.0 | 6.84682E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99975E-07 | 0 | 0 |
K/R | None | None | 0.999 | N | 0.582 | 0.364 | 0.300784259202 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9456 | likely_pathogenic | 0.9491 | pathogenic | -1.003 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
K/C | 0.9195 | likely_pathogenic | 0.9264 | pathogenic | -1.079 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/D | 0.9862 | likely_pathogenic | 0.9886 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
K/E | 0.8966 | likely_pathogenic | 0.8991 | pathogenic | -0.127 | Destabilizing | 0.999 | D | 0.555 | neutral | D | 0.525500058 | None | None | N |
K/F | 0.9557 | likely_pathogenic | 0.9492 | pathogenic | -0.756 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
K/G | 0.9652 | likely_pathogenic | 0.9697 | pathogenic | -1.375 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/H | 0.7371 | likely_pathogenic | 0.7465 | pathogenic | -1.701 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/I | 0.7903 | likely_pathogenic | 0.7614 | pathogenic | -0.025 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
K/L | 0.7671 | likely_pathogenic | 0.7638 | pathogenic | -0.025 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/M | 0.6646 | likely_pathogenic | 0.6525 | pathogenic | -0.105 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.502533957 | None | None | N |
K/N | 0.9526 | likely_pathogenic | 0.9545 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.507306897 | None | None | N |
K/P | 0.9869 | likely_pathogenic | 0.9892 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
K/Q | 0.6226 | likely_pathogenic | 0.6216 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.498241543 | None | None | N |
K/R | 0.0947 | likely_benign | 0.0965 | benign | -0.7 | Destabilizing | 0.999 | D | 0.582 | neutral | N | 0.458848921 | None | None | N |
K/S | 0.972 | likely_pathogenic | 0.9748 | pathogenic | -1.493 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | N |
K/T | 0.8794 | likely_pathogenic | 0.8764 | pathogenic | -1.132 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.524993079 | None | None | N |
K/V | 0.783 | likely_pathogenic | 0.7779 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
K/W | 0.9549 | likely_pathogenic | 0.9526 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/Y | 0.914 | likely_pathogenic | 0.9105 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.